RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 THBDP07204 575 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 CDKN1AP38936 164 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 CENPVQ7Z7K6 275 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 SNAI2O43623 268 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 MEIG1Q5JSS6 88 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 GGTLC1Q9BX51 225 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 TICRRQ7Z2Z1 1910 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 COL6A6A6NMZ7 2263 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 C9JCJ5 164 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 ASCL2Q99929 193 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 FOXL1Q12952 345 aa13.37□□□□□ -0.27
HMGXB3-202ENST00000503427 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 LYL1P12980 280 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 SLC50A1Q9BRV3 221 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 CLEC19AQ6UXS0 136 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 TNFRSF14Q92956 283 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 NPFFO15130 113 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 TSKUQ8WUA8 353 aa13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 RPUSD1Q9UJJ7 312 aaKnown RBP13.36□□□□□ -0.27
HMGXB3-202ENST00000503427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 IGKV1-5P01602 117 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 LINC00614P0C842 121 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 ST6GALNAC3Q8NDV1 305 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 ETV2O00321 342 aaPredicted RBP13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 CFPP27918 469 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 ATP5L2Q7Z4Y8 100 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 ZCCHC24Q8N2G6 241 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 LY6G6EA0A0G2JKS1 128 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 PAX1P15863 534 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 PSG8Q9UQ74 426 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 U3KQA8 63 aa13.35□□□□□ -0.27
HMGXB3-202ENST00000503427 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 Q6ZS49 121 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 LINC00469Q8N7U9 141 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 TMEM190Q8WZ59 177 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 DOCK8Q8NF50 2099 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 ANAPC1Q9H1A4 1944 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 PSPNO60542 156 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 FHL1Q13642 323 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 AMBPP02760 352 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 TNFRSF18Q9Y5U5 241 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 RNF144BQ7Z419 303 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 MTURNQ8N3F0 131 aa13.34□□□□□ -0.27
HMGXB3-202ENST00000503427 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.27
HMGXB3-202ENST00000503427 PPBPP02775 128 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 LINC01551Q86U37 167 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 SPCS1Q9Y6A9 102 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 TP53BP1Q12888 1972 aaPredicted RBP13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 TTC32Q5I0X7 151 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 FAM169BQ8N8A8 192 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 HBDP02042 147 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 LEPP41159 167 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 SCGB1A1P11684 91 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.28
HMGXB3-202ENST00000503427 TGFAP01135 160 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 GFI1BQ5VTD9 330 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 AGMATQ9BSE5 352 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 SPTBN1Q01082 2364 aaKnown RBP13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 C5orf30Q96GV9 206 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 SPTAN1Q13813 2472 aaKnown RBP13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 HGFACQ04756 655 aa13.32□□□□□ -0.28
HMGXB3-202ENST00000503427 TMEM50AO95807 157 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 OR10W1Q8NGF6 305 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 NXT2Q9NPJ8 142 aaKnown RBP13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 NUTF2P61970 127 aaKnown RBP13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 OR4X2Q8NGF9 303 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 A0A0G2JNJ9 132 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 ZNF672Q499Z4 452 aaPredicted RBP13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 Q9UFV3 132 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 OR5AN1Q8NGI8 311 aa13.31□□□□□ -0.28
HMGXB3-202ENST00000503427 A0A1B0GWB2 263 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 SRSF6Q13247 344 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 MRAP2Q96G30 205 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms