RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 C1orf195Q5TG92 126 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 LPCAT3Q6P1A2 487 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TRAPPC6BQ86SZ2 158 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 LINC00301Q8NCQ3 95 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 ST6GALNAC3Q8NDV1 305 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TMEM254Q8TBM7 123 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TOMM6Q96B49 74 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 OSTCQ9NRP0 149 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 EPDR1Q9UM22 224 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 HEATR1Q9H583 2144 aaKnown RBP-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 HIVEP3Q5T1R4 2406 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TNS3Q68CZ2 1445 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 ABCC11Q96J66 1382 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 SETD2Q9BYW2 2564 aaPredicted RBP-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 CACNA1CQ13936 2221 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 CELSR1Q9NYQ6 3014 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 TRAV9-1A0A075B6T8 112 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 TRAV3A0A0B4J244 114 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 DHFRP00374 187 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 C8orf88P0DMB2 117 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 S100A4P26447 101 aaKnown RBP-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 NAA20P61599 178 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 ESRGQ1W209 222 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 C2orf82Q6UX34 121 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 FUNDC1Q8IVP5 155 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 TET1Q8NFU7 2136 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 DNAJB3Q8WWF6 145 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 H1FXQ92522 213 aaKnown RBP-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 ZC2HC1AQ96GY0 325 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 LYSMD1Q96S90 227 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 NIPSNAP1Q9BPW8 284 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 OR51V1Q9H2C8 321 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 PRTFDC1Q9NRG1 225 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 FBXL12Q9NXK8 326 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 RNF11Q9Y3C5 154 aa-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 V9GYY5 206 aaPredicted RBP-0.3□□□□□ -2.46
CCDC93-209ENST00000488908 TRBV30A0A0K0K1B3 111 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 TCRBV4S1A1TA0A5B7 111 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 ERICH2A1L162 156 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 FABP12A6NFH5 140 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 DPRXA6NFQ7 191 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 SMIM9A6NGZ8 99 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 GOLGA8KD6RF30 607 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 C5orf67F2Z3F1 127 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 AHSA1O95433 338 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 ZNF682O95780 498 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 SPINK1P00995 79 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 ANP32AP39687 249 aaKnown RBP-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 YPEL3P61236 119 aaPredicted RBP-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 MED21Q13503 144 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 BRMS1LQ5PSV4 323 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 LRRN1Q6UXK5 716 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 PLEKHG7Q6ZR37 379 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 PIGXQ8TBF5 258 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 LINC00052Q96N35 136 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 TP53RKQ96S44 253 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 GPER1Q99527 375 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 PLEKHJ1Q9NW61 149 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 TAS2R7Q9NYW3 318 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 TP73-AS1Q9UF72 201 aa-0.31□□□□□ -2.46
CCDC93-209ENST00000488908 NBEAL1Q6ZS30 2694 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 IQCF5A8MTL0 148 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 EVPLLA8MZ36 301 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 H3BRM9 83 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 BUB1B-PAK6H3BSN5 160 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 OR5G3P0C626 314 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 OR4E1P0C645 316 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 CCL4P13236 92 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 HADHBP55084 474 aaKnown RBP-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 CDC42P60953 191 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 RAB5BP61020 215 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 PMAIP1Q13794 54 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 CLEC6AQ6EIG7 209 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 C10orf99Q6UWK7 81 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 TEN1Q86WV5 123 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 C20orf196Q8IYI0 205 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 GDPD1Q8N9F7 314 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 ZNF431Q8TF32 576 aaPredicted RBP-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 ZNF75CPQ92670 426 aaPredicted RBP-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 C7orf50Q9BRJ6 194 aaKnown RBP-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 PSTPIP2Q9H939 334 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 UNC13CQ8NB66 2214 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 PIEZO1Q92508 2521 aa-0.32□□□□□ -2.46
CCDC93-209ENST00000488908 KNTC1P50748 2209 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 ECM29Q5VYK3 1845 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 PHRF1Q9P1Y6 1649 aaKnown RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 NUPR2A6NF83 97 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 HSBP1L1C9JCN9 74 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 CXCR6O00574 342 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 HLA-DRB1P01911 266 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 PSMB6P28072 239 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 MLLT11Q13015 90 aaPredicted RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 TSNQ15631 228 aaKnown RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 SPATA45Q537H7 98 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 OGFRL1Q5TC84 451 aaPredicted RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 CNPY4Q8N129 248 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 PXT1Q8NFP0 134 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 OR8D4Q8NGM9 314 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms