RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 PPP5D1E7EU14 171 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 LGALS7P47929 136 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 TMEM183AQ8IXX5 376 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 ENY2Q9NPA8 101 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 WDR83OSQ9Y284 106 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 A0A1B0GV90 55 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-230ENST00000488543 ARL14EPLP0DKL9 152 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-230ENST00000488543 HTR1DP28221 377 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 CD1BP29016 333 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 VMA21Q3ZAQ7 101 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 C10orf55Q5SWW7 151 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 LHFPL4Q7Z7J7 247 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 OR10W1Q8NGF6 305 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 PITPNC1Q9UKF7 332 aa9.73□□□□□ -0.85
HDAC6-230ENST00000488543 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 FOXH1O75593 365 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 GZMBP10144 247 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 PSG5Q15238 335 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 Q5PR19 223 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 CFHR4Q92496 578 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 C1orf159Q96HA4 380 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 CSPG4Q6UVK1 2322 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 A0A096LNT2 108 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 INS-IGF2F8WCM5 200 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 TOX4O94842 621 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
HDAC6-230ENST00000488543 RNASE2P10153 161 aaKnown RBP9.72□□□□□ -0.85
HDAC6-230ENST00000488543 OR2T10Q8NGZ9 312 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 MGST2Q99735 147 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 PYGO2Q9BRQ0 406 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
HDAC6-230ENST00000488543 BEX4Q9NWD9 120 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-230ENST00000488543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC6-230ENST00000488543 AKAP9Q99996 3911 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 TIMM23O14925 209 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 DSCR9P59020 149 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 PMS2P11Q13670 270 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-230ENST00000488543 TREML4Q6UXN2 200 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 LINC01551Q86U37 167 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 TBX15Q96SF7 602 aa9.71□□□□□ -0.85
HDAC6-230ENST00000488543 ITPR3Q14573 2671 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 A0A1W2PPV4 95 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 VENTXO95231 258 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 DDTP30046 118 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 ACOT6Q3I5F7 207 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-230ENST00000488543 C2orf83Q53S99 150 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 KRTAP1-3Q8IUG1 177 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.86
HDAC6-230ENST00000488543 ZNF320A2RRD8 509 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 NUPR1O60356 82 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 MBP02144 154 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 FRMD6-AS1P0C7T7 363 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 CD33P20138 364 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 FBLN7Q53RD9 439 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 DYNAPQ8N1N2 210 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 POLR3KQ9Y2Y1 108 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-230ENST00000488543 SIGLEC9Q9Y336 463 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 YTHDF2Q9Y5A9 579 aaKnown RBP9.7□□□□□ -0.86
HDAC6-230ENST00000488543 PXMP4Q9Y6I8 212 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 CREBBPQ92793 2442 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 ABCA1O95477 2261 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 IGHV3OR16-10A0A075B7F0 116 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 C17orf112F2Z3M2 114 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 SLC25A16P16260 332 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 WT1-ASQ06250 92 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 TMEM256Q8N2U0 113 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 Q96MF0 132 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 GGTLC1Q9BX51 225 aa9.7□□□□□ -0.86
HDAC6-230ENST00000488543 GATCO43716 136 aaKnown RBP9.69□□□□□ -0.86
HDAC6-230ENST00000488543 ACTL6BO94805 426 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 CD24P25063 80 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 CEACAM3P40198 252 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 ATP5IP56385 69 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-230ENST00000488543 SSBP2P81877 361 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-230ENST00000488543 MMD2Q8IY49 270 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 IMMP2LQ96T52 175 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 RNF5Q99942 180 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
HDAC6-230ENST00000488543 LSM4Q9Y4Z0 139 aaKnown RBP9.69□□□□□ -0.86
HDAC6-230ENST00000488543 TLN2Q9Y4G6 2542 aa9.69□□□□□ -0.86
HDAC6-230ENST00000488543 A0A1W2PN81 502 aa9.68□□□□□ -0.86
HDAC6-230ENST00000488543 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
HDAC6-230ENST00000488543 SLC17A3O00476 420 aa9.68□□□□□ -0.86
HDAC6-230ENST00000488543 MSMBP08118 114 aa9.68□□□□□ -0.86
HDAC6-230ENST00000488543 PAX8Q06710 450 aa9.68□□□□□ -0.86
HDAC6-230ENST00000488543 ZNF600Q6ZNG1 722 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms