RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 DEFA4P12838 97 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 S100A4P26447 101 aaKnown RBP2.1□□□□□ -2.07
HFM1-208ENST00000488023 CCR2P41597 374 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 XCL1P47992 114 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 EVX1P49640 407 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 FOXF1Q12946 379 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 MIAQ16674 131 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 ANGPTL5Q86XS5 388 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 KRTAP11-1Q8IUC1 163 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 RPP25LQ8N5L8 163 aaKnown RBP2.1□□□□□ -2.07
HFM1-208ENST00000488023 NUP35Q8NFH5 326 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 SCRT1Q9BWW7 348 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 AICDAQ9GZX7 198 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 TMEM133Q9H2Q1 129 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 RNF122Q9H9V4 155 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 SLC39A9Q9NUM3 307 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 CKLFQ9UBR5 152 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 MINOS1-NBL1R4GNA1 71 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 SIPA1L1O43166 1804 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 SPHKAPQ2M3C7 1700 aa2.1□□□□□ -2.07
HFM1-208ENST00000488023 TRPM3Q9HCF6 1732 aaPredicted RBP2.1□□□□□ -2.07
HFM1-208ENST00000488023 ZNF142P52746 1687 aaPredicted RBP2.1□□□□□ -2.07
HFM1-208ENST00000488023 MAST2Q6P0Q8 1798 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 ZNF638Q14966 1978 aaKnown RBP2.09□□□□□ -2.07
HFM1-208ENST00000488023 J3KT08 172 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 NDUFA2O43678 99 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 OR2T1O43869 369 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 C1QAP02745 245 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 BPGMP07738 259 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 GPX2P18283 190 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 FKBP2P26885 142 aaKnown RBP2.09□□□□□ -2.07
HFM1-208ENST00000488023 S100A11P31949 105 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
HFM1-208ENST00000488023 GTF2A1P52655 376 aaPredicted RBP2.09□□□□□ -2.07
HFM1-208ENST00000488023 AP1S1P61966 158 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 SPANXN3Q5MJ09 141 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.09□□□□□ -2.07
HFM1-208ENST00000488023 LRRC18Q8N456 261 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 ZNF561Q8N587 486 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 OR8J3Q8NGG0 315 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 OR8D4Q8NGM9 314 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 BORCS8Q96FH0 119 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 TSC22D3Q99576 134 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 TUBA4BQ9H853 241 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 XAGE1AQ9HD64 81 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 SPANXA1Q9NS26 97 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 MED31Q9Y3C7 131 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 PLXND1Q9Y4D7 1925 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 CACNA1SQ13698 1873 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 KIF13BQ9NQT8 1826 aa2.09□□□□□ -2.07
HFM1-208ENST00000488023 FRMPD1Q5SYB0 1578 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 ABCC3O15438 1527 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 RGPD1P0DJD0 1748 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 A2ML1A8K2U0 1454 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 ATP10BO94823 1461 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 IGKV2D-24A0A075B6R9 120 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 TRAV36DV7A0A075B6V5 113 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 TRDV1A0A1B0GX56 115 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 TMEM256-PLSCR3K7ERE1 68 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 GZMBP10144 247 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 EIF2B2P49770 351 aaKnown RBP2.09□□□□□ -2.08
HFM1-208ENST00000488023 MOBPQ13875 183 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 MSMO1Q15800 293 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 RTL8BQ17RB0 113 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 DEFB115Q30KQ5 88 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 BRMS1LQ5PSV4 323 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 DNLZQ5SXM8 178 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 SPINT4Q6UDR6 99 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 RNF182Q8N6D2 247 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 OR8B2Q96RD0 313 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 PFDN5Q99471 154 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 RTL8AQ9BWD3 113 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 CACYBPQ9HB71 228 aaKnown RBP2.09□□□□□ -2.08
HFM1-208ENST00000488023 OTORQ9NRC9 128 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 NUBP2Q9Y5Y2 271 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 R4GN34 69 aa2.09□□□□□ -2.08
HFM1-208ENST00000488023 NCOA3Q9Y6Q9 1424 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 DIP2AQ14689 1571 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 RFX7Q2KHR2 1363 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 ZMYM4Q5VZL5 1548 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 FAM135AQ9P2D6 1515 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 COL16A1Q07092 1604 aaPredicted RBP2.08□□□□□ -2.08
HFM1-208ENST00000488023 MYO3AQ8NEV4 1616 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 BIVM-ERCC5R4GMW8 1640 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 IRGMA1A4Y4 181 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 GABARAPH6UMI1 98 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 PLXNB1O43157 2135 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 CDS2O95674 445 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 ZNF728P0DKX0 622 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 HIST1H4AP62805 103 aaKnown RBP2.08□□□□□ -2.08
HFM1-208ENST00000488023 SUPT4H1P63272 117 aaKnown RBP2.08□□□□□ -2.08
HFM1-208ENST00000488023 SLC38A11Q08AI6 406 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 ZNF141Q15928 474 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 CROCCP2Q86T23 111 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 OR51T1Q8NGJ9 327 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 TEX37Q96LM6 180 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 DUSP21Q9H596 190 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms