RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 FAM24BQ8N5W8 94 aa11.74□□□□□ -0.53
GABPA-203ENST00000487266 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
GABPA-203ENST00000487266 ACY3Q96HD9 319 aa11.74□□□□□ -0.53
GABPA-203ENST00000487266 SLC25A21Q9BQT8 299 aaPredicted RBP11.74□□□□□ -0.53
GABPA-203ENST00000487266 FLVCR2Q9UPI3 526 aa11.74□□□□□ -0.53
GABPA-203ENST00000487266 PITX3O75364 302 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 IAPPP10997 89 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 OR10J1P30954 320 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 BTCP35070 178 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 INPP1P49441 399 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 RBMS2Q15434 407 aaKnown RBP11.73□□□□□ -0.53
GABPA-203ENST00000487266 DEFB135Q30KP9 77 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 DEDD2Q8WXF8 326 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 NPIPB3Q92617 1050 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 LYSTQ99698 3801 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 MAP6D1Q9H9H5 199 aa11.73□□□□□ -0.53
GABPA-203ENST00000487266 DUXBA0A1W2PPF3 345 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 HOXB5P09067 269 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 SLC25A4P12235 298 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 NPPCP23582 126 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
GABPA-203ENST00000487266 LRTM2Q8N967 370 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 OR1S2Q8NGQ3 325 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 METTL26Q96S19 204 aa11.72□□□□□ -0.53
GABPA-203ENST00000487266 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 SCGB2A1O75556 95 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 IL7P13232 177 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 CRYBB3P26998 211 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 P2RY1P47900 373 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 USF2Q15853 346 aaPredicted RBP11.71□□□□□ -0.53
GABPA-203ENST00000487266 MAGT1Q9H0U3 335 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 U3KQ87 197 aa11.71□□□□□ -0.53
GABPA-203ENST00000487266 TENM2Q9NT68 2774 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 MPTX1A8MV57 137 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 ADAP1O75689 374 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 NDUFB6O95139 128 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 IFNA4P05014 189 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 IL4P05112 153 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 ANXA7P20073 488 aaKnown RBP11.7□□□□□ -0.54
GABPA-203ENST00000487266 BMI1P35226 326 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 APOC4P55056 127 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 GGNBP1Q5YKI7 109 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 STXBP6Q8NFX7 210 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 CACFD1Q9UGQ2 172 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 RABAC1Q9UI14 185 aa11.7□□□□□ -0.54
GABPA-203ENST00000487266 AGRNO00468 2067 aa11.69□□□□□ -0.54
GABPA-203ENST00000487266 C9orf170A2RU37 121 aa11.69□□□□□ -0.54
GABPA-203ENST00000487266 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
GABPA-203ENST00000487266 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
GABPA-203ENST00000487266 ETFRF1Q6IPR1 90 aa11.69□□□□□ -0.54
GABPA-203ENST00000487266 PAIP2BQ9ULR5 123 aaKnown RBP11.69□□□□□ -0.54
GABPA-203ENST00000487266 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
GABPA-203ENST00000487266 IGKV1D-37A0A075B6S9 117 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 NAP1L6A6NFF2 107 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 TOMM40O96008 361 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 PSG1P11464 419 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 DEFB131AP59861 70 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 PAFAH1B2P68402 229 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.54
GABPA-203ENST00000487266 DHRS2Q13268 280 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 GAMTQ14353 236 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 Q8WTZ3 238 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 TMEM231Q9H6L2 316 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 U3KQE9 123 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
GABPA-203ENST00000487266 A0A1W2PS18 150 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 H3BP45 60 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 SPRY2O43597 315 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 HNRNPCP07910 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
GABPA-203ENST00000487266 OR4E1P0C645 316 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 SLC25A6P12236 298 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 UBE2MP61081 183 aaKnown RBP11.67□□□□□ -0.54
GABPA-203ENST00000487266 ZNF90Q03938 601 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 GLMPQ8WWB7 406 aa11.67□□□□□ -0.54
GABPA-203ENST00000487266 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 FAM90A26D6RGX4 464 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 K7EQG2 157 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 WRBO00258 174 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 PLA2G10O15496 165 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 SYNGR2O43760 224 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 CD5P06127 495 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 ZNF688P0C7X2 276 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 RD3LP0DJH9 198 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 Q6ZWC4 215 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
GABPA-203ENST00000487266 SLC35E1Q96K37 410 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
GABPA-203ENST00000487266 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms