RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 OR5AU1Q8NGC0 362 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 OR2T10Q8NGZ9 312 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 OR1P1Q8NH06 330 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 OR4X1Q8NH49 305 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
SEC13-216ENST00000479868 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 ODF3BA8MYP8 253 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 PPP5D1E7EU14 171 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 C19orf84I3L1E1 186 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 CD24P25063 80 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
SEC13-216ENST00000479868 PLGLAQ15195 96 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 FBLN7Q53RD9 439 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 GFI1BQ5VTD9 330 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 ETFRF1Q6IPR1 90 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 CFHR4Q92496 578 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 RNF5Q99942 180 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 F11RQ9Y624 299 aaKnown RBP10.38□□□□□ -0.75
SEC13-216ENST00000479868 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 PYYP10082 97 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 PRTN3P24158 256 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
SEC13-216ENST00000479868 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
SEC13-216ENST00000479868 SELENOTP62341 195 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
SEC13-216ENST00000479868 MMDQ15546 238 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 TEX38Q6PEX7 206 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 PFDN5Q99471 154 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 RNF2Q99496 336 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 TNFRSF19Q9NS68 423 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 CFAP46Q8IYW2 2715 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 C9JCJ5 164 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 UBE2L3P68036 154 aaKnown RBP10.37□□□□□ -0.75
SEC13-216ENST00000479868 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
SEC13-216ENST00000479868 EAF1Q96JC9 268 aaPredicted RBP10.37□□□□□ -0.75
SEC13-216ENST00000479868 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 PPP1R2P9O14990 202 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 SMIM6P0DI80 62 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 GSX1Q9H4S2 264 aaPredicted RBP10.36□□□□□ -0.75
SEC13-216ENST00000479868 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
SEC13-216ENST00000479868 HELTA6NFD8 242 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 A6NNC1 897 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 LINC00305Q7Z4B0 112 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 VMO1Q7Z5L0 202 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 TCEAL7Q9BRU2 100 aa10.36□□□□□ -0.75
SEC13-216ENST00000479868 NBR2O15453 112 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 GATCO43716 136 aaKnown RBP10.35□□□□□ -0.75
SEC13-216ENST00000479868 TYMSP04818 313 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 S100A9P06702 114 aaKnown RBP10.35□□□□□ -0.75
SEC13-216ENST00000479868 SNRPCP09234 159 aaKnown RBP10.35□□□□□ -0.75
SEC13-216ENST00000479868 ORM2P19652 201 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 CEACAM3P40198 252 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 TRGV9Q99603 122 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 PAXXQ9BUH6 204 aa10.35□□□□□ -0.75
SEC13-216ENST00000479868 A0A0U1RQK1 487 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 CORTO00230 105 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 CNIH1O95406 144 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 FOXL1Q12952 345 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 OR5I1Q13606 314 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 SSX2Q16385 188 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 MAJINQ3KP22 176 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 DYNAPQ8N1N2 210 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 OR1B1Q8NGR6 318 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 IMMP2LQ96T52 175 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 GPR61Q9BZJ8 451 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 LY96Q9Y6Y9 160 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 SLC17A3O00476 420 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 GNG4P50150 75 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 LCN2P80188 198 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 PAX2Q02962 417 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 HIST3H2BBQ8N257 126 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 WNT10AQ9GZT5 417 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
SEC13-216ENST00000479868 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
SEC13-216ENST00000479868 NDUFA3O95167 84 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 HES1Q14469 280 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 NPBQ8NG41 125 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 FXYD5Q96DB9 178 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 FAM103A1Q9BTL3 118 aaKnown RBP10.33□□□□□ -0.76
SEC13-216ENST00000479868 VPS13CQ709C8 3753 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 ZNF320A2RRD8 509 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 I3L2K1 104 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 HOXB4P17483 251 aaPredicted RBP10.33□□□□□ -0.76
SEC13-216ENST00000479868 EFNA4P52798 201 aa10.33□□□□□ -0.76
SEC13-216ENST00000479868 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
SEC13-216ENST00000479868 J3KRW8 73 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 KIR3DL3Q8N743 410 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 IGSF10Q6WRI0 2623 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 IGLC1P0CG04 106 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms