RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 ICE1Q9Y2F5 2266 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 ZNF430Q9H8G1 570 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-207ENST00000470763 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 PEX7O00628 323 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 CSN3P07498 182 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 OR4S2Q8NH73 311 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 NANOS1Q8WY41 292 aaKnown RBP11.19□□□□□ -0.62
NPHP4-207ENST00000470763 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 PLAUP00749 431 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 HBBP68871 147 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 FAM231DQ6ZW35 169 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 KLF14Q8TD94 323 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-207ENST00000470763 FAM167A-AS1Q96KT0 104 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
NPHP4-207ENST00000470763 IQCF6A8MYZ5 107 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 J3QR06 171 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 GOSR1O95249 250 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 TNFSF15O95150 251 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 HIST1H1EP10412 219 aaKnown RBP11.18□□□□□ -0.62
NPHP4-207ENST00000470763 ARF6P62330 175 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 FAM90A1Q86YD7 464 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-207ENST00000470763 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
NPHP4-207ENST00000470763 CIDEAO60543 219 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 ZNF883P0CG24 379 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 HTR1DP28221 377 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 MRPL49Q13405 166 aaKnown RBP11.18□□□□□ -0.62
NPHP4-207ENST00000470763 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 TMEM251Q8N6I4 163 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 TEX45Q8NA69 505 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
NPHP4-207ENST00000470763 MED13Q9UHV7 2174 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-207ENST00000470763 SMIM21Q3B7S5 101 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 LINC00322Q6ZN03 302 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-207ENST00000470763 DDB2Q92466 427 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 C1RLQ9NZP8 487 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 CACNA1BQ00975 2339 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 CHD6Q8TD26 2715 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 PCSK5Q92824 1860 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 LYZL6O75951 148 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 FOXC1Q12948 553 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
NPHP4-207ENST00000470763 H3BUT2 72 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 NBEAP1P0C6P0 100 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 LOXL3P58215 753 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 OR10W1Q8NGF6 305 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 LRRC29Q8WV35 223 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
NPHP4-207ENST00000470763 AP1S3Q96PC3 154 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 TTTY12Q9BZ98 90 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 B4GALT7Q9UBV7 327 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 LOC400499M0QZD8 3231 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 IGHV3OR15-7A0A075B7D8 119 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 SAA2P0DJI9 122 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-207ENST00000470763 PRDX2P32119 198 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 FABP6P51161 128 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 ZNRF1Q8ND25 227 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 H1FXQ92522 213 aaKnown RBP11.16□□□□□ -0.62
NPHP4-207ENST00000470763 FAM173AQ9BQD7 235 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-207ENST00000470763 HLA-DRB1P01911 266 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 REG1BP48304 166 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 PAX2Q02962 417 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
NPHP4-207ENST00000470763 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 ANKRD11Q6UB99 2663 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-207ENST00000470763 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-207ENST00000470763 LIPFP07098 398 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 S100A7AQ86SG5 101 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 TMUB1Q9BVT8 246 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 SCNM1Q9BWG6 230 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 CADP27708 2225 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 G3V4G9 280 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 CD46P15529 392 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 FAM162BQ5T6X4 162 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
NPHP4-207ENST00000470763 RAB37Q96AX2 223 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms