RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 DLK1P80370 383 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 BAXQ07812 192 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 FCN2Q15485 313 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 ATP6V1FQ16864 119 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 OR11H7Q8NGC8 314 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 THAP6Q8TBB0 222 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 Q8WTZ3 238 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 CHRDL1Q9BU40 450 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
SPTLC1-204ENST00000469778 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 SEC14L6B5MCN3 397 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 IGHV3-48P01763 117 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 OR10J1P30954 320 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 BMI1P35226 326 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 TMEM144Q7Z5S9 345 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 TMEM252Q8N6L7 170 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 TMEM190Q8WZ59 177 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 ACY3Q96HD9 319 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 GINS3Q9BRX5 216 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 TECRQ9NZ01 308 aaKnown RBP9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 MRPL27Q9P0M9 148 aaKnown RBP9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 PFDN2Q9UHV9 154 aa9.65□□□□□ -0.86
SPTLC1-204ENST00000469778 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 ZFP92A6NM28 416 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 IGKV1-17P01599 117 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 CD5P06127 495 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 METTL15P1P0C7V9 234 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 RD3LP0DJH9 198 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 LYL1P12980 280 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 S100A7P31151 101 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 RAB31Q13636 194 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 OR8G2PQ6IF36 304 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 Q6ZNX1 250 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 TRGV9Q99603 122 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 RNF126Q9BV68 326 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 MGAM2Q2M2H8 2515 aa9.64□□□□□ -0.87
SPTLC1-204ENST00000469778 TOMM40O96008 361 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 C8orf88P0DMB2 117 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 IGLL1P15814 213 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 CBLN1P23435 193 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 SELENOTP62341 195 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 LRRC37A5PQ49AS3 106 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 SAMD5Q5TGI4 173 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 C11orf87Q6NUJ2 197 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 IL34Q6ZMJ4 242 aa9.63□□□□□ -0.87
SPTLC1-204ENST00000469778 NOTCH3Q9UM47 2321 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 A0A1W2PS18 150 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 FAM24AA6NFZ4 105 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 H0YIZ8 118 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 MPDU1O75352 247 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 SAP30O75446 220 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 YIF1AO95070 293 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 CSN3P07498 182 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 FOLR2P14207 255 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 NUP62P37198 522 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 AKR1C1Q04828 323 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 EGFEM1PQ0D2K5 195 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 KPRPQ5T749 579 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 TOMM20LQ6UXN7 152 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 ACOT7LQ6ZUV0 252 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 NARS2Q96I59 477 aaKnown RBP9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 ZC4H2Q9NQZ6 224 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 OR5AC2Q9NZP5 309 aa9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 PUS1Q9Y606 427 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPTLC1-204ENST00000469778 TRAV14DV4A0A0A6YYC5 116 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 TMEM213A2RRL7 107 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 CST7O76096 145 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 NPPCP23582 126 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 RPL12P30050 165 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 SLC38A11Q08AI6 406 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 TIGITQ495A1 244 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 UNQ9165/PRO28630Q6UXU0 137 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 METTL26Q96S19 204 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 C20orf24Q9BUV8 137 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 UQCC1Q9NVA1 299 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
SPTLC1-204ENST00000469778 IGKV1D-37A0A075B6S9 117 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 IGSF23A1L1A6 192 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 DFFBO76075 338 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 PSG1P11464 419 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 EWSR1Q01844 656 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
SPTLC1-204ENST00000469778 HAPLN4Q86UW8 402 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms