RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 LY6HO94772 140 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 VAMP3Q15836 100 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 MED13Q9UHV7 2174 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 PLCE1Q9P212 2302 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 LOC389332A0A1B0GUA5 103 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 CBLN1P23435 193 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 HBBP68871 147 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 LIME1Q9H400 295 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
BRAT1-203ENST00000467558 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 ANKHD1Q8IWZ3 2542 aaKnown RBP11.29□□□□□ -0.6
BRAT1-203ENST00000467558 FBLL1A6NHQ2 334 aaKnown RBP11.29□□□□□ -0.6
BRAT1-203ENST00000467558 C1QTNF9BB2RNN3 333 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 HAX1O00165 279 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
BRAT1-203ENST00000467558 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
BRAT1-203ENST00000467558 PRTN3P24158 256 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 DDB2Q92466 427 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 KLRD1Q13241 179 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 TCF24Q7RTU0 167 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 IGHV3-66A0A0C4DH42 116 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 C15orf62A8K5M9 175 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 PYYP10082 97 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 PKIAP61925 76 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
BRAT1-203ENST00000467558 KIAA1549LQ6ZVL6 1849 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 A0A1B0GW64 132 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 IGHV3-11P01762 117 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 IGKV1-16P04430 117 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 C5orf64Q2M2E5 130 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.6
BRAT1-203ENST00000467558 SLX1AQ9BQ83 275 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 B4DSR2 109 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 TCAPO15273 167 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.6
BRAT1-203ENST00000467558 M0R143 59 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 LEPROTL1O95214 131 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 Q6ZSR3 168 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 NEU1Q99519 415 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 NOTCH3Q9UM47 2321 aa11.27□□□□□ -0.61
BRAT1-203ENST00000467558 YLPM1P49750 1951 aaKnown RBP11.26□□□□□ -0.61
BRAT1-203ENST00000467558 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 MGST2Q99735 147 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 DCAF16Q9NXF7 216 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 MOB4Q9Y3A3 225 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 GRIFINA4D1Z8 144 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
BRAT1-203ENST00000467558 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
BRAT1-203ENST00000467558 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
BRAT1-203ENST00000467558 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
BRAT1-203ENST00000467558 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 A0A1B0GWJ7 208 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 K7EM74 188 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 HERVK_113P61574 105 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 SLC50A1Q9BRV3 221 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 REG4Q9BYZ8 158 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 Q6AWC8 147 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 DKK4Q9UBT3 224 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
BRAT1-203ENST00000467558 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
BRAT1-203ENST00000467558 MYOD1P15172 320 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 SSC4DQ8WTU2 575 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 TRGV9Q99603 122 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 ATRXP46100 2492 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 RFNGQ9Y644 331 aa11.25□□□□□ -0.61
BRAT1-203ENST00000467558 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 PMCHL1Q16048 86 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 BEND2Q8NDZ0 799 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
BRAT1-203ENST00000467558 PTPRQQ9UMZ3 2332 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 PSG1P11464 419 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 KRTAP27-1Q3LI81 207 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 LYPD6Q86Y78 171 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 OCC1Q8TAD7 63 aa11.24□□□□□ -0.61
BRAT1-203ENST00000467558 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms