RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 H2BFSP57053 126 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 YPEL3P61236 119 aaPredicted RBP12.89□□□□□ -0.35
USP39-211ENST00000465282 RAB32Q13637 225 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 GAMTQ14353 236 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 UNQ9165/PRO28630Q6UXU0 137 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 NPIPB3Q92617 1050 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 ACY3Q96HD9 319 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 GINS3Q9BRX5 216 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 MED28Q9H204 178 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
USP39-211ENST00000465282 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
USP39-211ENST00000465282 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
USP39-211ENST00000465282 SIX6O95475 246 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 FABP1P07148 127 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 FOLR2P14207 255 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 S100A10P60903 97 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 ASB13Q8WXK3 278 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
USP39-211ENST00000465282 PMS2P5A8MQ11 134 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 DEDDO75618 318 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 YIF1AO95070 293 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 PET100P0DJ07 73 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 Q8WTZ3 238 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 C20orf24Q9BUV8 137 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 GGACTQ9BVM4 153 aa12.87□□□□□ -0.35
USP39-211ENST00000465282 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
USP39-211ENST00000465282 E5RGE8 158 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 BCAP31P51572 246 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 DLK1P80370 383 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 OR8G2PQ6IF36 304 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 TOMM20LQ6UXN7 152 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 THAP8Q8NA92 274 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 PPP1R1CQ8WVI7 109 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
USP39-211ENST00000465282 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP39-211ENST00000465282 TRAV14DV4A0A0A6YYC5 116 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 TOMM40O96008 361 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 RD3LP0DJH9 198 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 BMI1P35226 326 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 CAV2P51636 162 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 KRTAP10-11P60412 298 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 TIGITQ495A1 244 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 LCN12Q6JVE5 192 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 ADAMTSL5Q6ZMM2 481 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 TRGV9Q99603 122 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
USP39-211ENST00000465282 CFDP00746 253 aaPredicted RBP12.84□□□□□ -0.35
USP39-211ENST00000465282 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
USP39-211ENST00000465282 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
USP39-211ENST00000465282 STX12Q86Y82 276 aa12.84□□□□□ -0.35
USP39-211ENST00000465282 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
USP39-211ENST00000465282 NPVFQ9HCQ7 196 aa12.84□□□□□ -0.35
USP39-211ENST00000465282 ZNF256Q9Y2P7 627 aaPredicted RBP12.84□□□□□ -0.35
USP39-211ENST00000465282 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
USP39-211ENST00000465282 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 MPC2O95563 127 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 CD5P06127 495 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 CXCL3P19876 107 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 S100A11P31949 105 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 P2RY1P47900 373 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 SULT1A1P50225 295 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 HBG1P69891 147 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 HBG2P69892 147 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 DEFA6Q01524 100 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 AKR1C1Q04828 323 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 FCN2Q15485 313 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 OR51G1Q8NGK1 321 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
USP39-211ENST00000465282 IGKV1D-37A0A075B6S9 117 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 IGHV7-4-1A0A0J9YVY3 117 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 A0A1W2PS18 150 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 FAM24AA6NFZ4 105 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 PSG1P11464 419 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 NPPCP23582 126 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 NARS2Q96I59 477 aaKnown RBP12.82□□□□□ -0.36
USP39-211ENST00000465282 METTL26Q96S19 204 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
USP39-211ENST00000465282 IGKV1OR2-108A0A075B7D4 117 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 CCNKO75909 580 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 CRYBB3P26998 211 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 BAXQ07812 192 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 FGL1Q08830 312 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 SLC38A11Q08AI6 406 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 CD300EQ496F6 205 aaPredicted RBP12.81□□□□□ -0.36
USP39-211ENST00000465282 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms