RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TIGITQ495A1 244 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 DEFB121Q5J5C9 76 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 LCN12Q6JVE5 192 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 TOMM20LQ6UXN7 152 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 OR1S2Q8NGQ3 325 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 ACY3Q96HD9 319 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 PUS1Q9Y606 427 aaKnown RBP eCLIP10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 IZUMO1RA6ND01 250 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 IGLC1P0CG04 106 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 OR10J1P30954 320 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 PAX9P55771 341 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 DCTN2Q13561 401 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 GAMTQ14353 236 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 SLC35E1Q96K37 410 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 MLXQ9UH92 298 aa10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 RCL1Q9Y2P8 373 aaKnown RBP10.97□□□□□ -0.65
SQSTM1-205ENST00000464493 TRAV14DV4A0A0A6YYC5 116 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 TAS2R30P59541 319 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 YPEL3P61236 119 aaPredicted RBP10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 BTNL8Q6UX41 500 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 GINS3Q9BRX5 216 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 SMPXQ9UHP9 88 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 LSM5Q9Y4Y9 91 aaKnown RBP10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 SELENOKQ9Y6D0 94 aa10.96□□□□□ -0.65
SQSTM1-205ENST00000464493 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 C7orf66A4D0T2 115 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 PRSS46E5RG02 174 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 K7EPK0 472 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 L7N2F9 121 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 GOSR2O14653 212 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 SSNA1O43805 119 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 TSC22D2O75157 780 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 VAMP2P63027 116 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 IL15RAQ13261 267 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 Q8WTZ3 238 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
SQSTM1-205ENST00000464493 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 SIX6O95475 246 aa10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 TMEM14EPQ6UXP3 125 aa10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 RBPMS2Q6ZRY4 209 aaKnown RBP10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 TMEM61Q8N0U2 210 aa10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 WDR89Q96FK6 387 aaPredicted RBP10.94□□□□□ -0.66
SQSTM1-205ENST00000464493 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 ZFP92A6NM28 416 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 PMS2P5A8MQ11 134 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 CHEK1O14757 476 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 METTL15P1P0C7V9 234 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 RD3LP0DJH9 198 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 PVALBP20472 110 aaPredicted RBP10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 S100A10P60903 97 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 RAB32Q13637 225 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 OR8G2PQ6IF36 304 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 NMES1Q9C002 83 aa10.93□□□□□ -0.66
SQSTM1-205ENST00000464493 TGP01266 2768 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 SCAF4O95104 1147 aaKnown RBP10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 TOMM40O96008 361 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 PSG1P11464 419 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 NPPCP23582 126 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 BCAP31P51572 246 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 CYCSP99999 105 aaKnown RBP10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 GTSCR1Q86UQ5 136 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 Q8N1Y9 231 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 OR10P1Q8NGE3 313 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 METTL26Q96S19 204 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 C11orf1Q9H5F2 150 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 ALG5Q9Y673 324 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 SMAD5-AS1Q9Y6J3 95 aa10.92□□□□□ -0.66
SQSTM1-205ENST00000464493 IGHV3OR16-13A0A075B7E8 117 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 IGHV3-74A0A0B4J1X5 117 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 CCNKO75909 580 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 APOHP02749 345 aaPredicted RBP10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 FABP1P07148 127 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 CRYBB3P26998 211 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 BMI1P35226 326 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 CAV2P51636 162 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 H2BFSP57053 126 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 ZNF90Q03938 601 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 THAP8Q8NA92 274 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 OR51G1Q8NGK1 321 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 ST8SIA2Q92186 375 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 RNF2Q99496 336 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 TRGV9Q99603 122 aa10.91□□□□□ -0.66
SQSTM1-205ENST00000464493 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 A0A1W2PS18 150 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 TSPAN4O14817 238 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 RLN2P04090 185 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 IL4P05112 153 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 CD81P60033 236 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms