RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SLC35E1Q96K37 410 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 TBX15Q96SF7 602 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 SMIM7Q9BQ49 75 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 POLR3KQ9Y2Y1 108 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-213ENST00000462730 MINOS1-NBL1R4GNA1 71 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 CELSR2Q9HCU4 2923 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 MED13LQ71F56 2210 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 A0A1W2PPV4 95 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 MOSP00540 346 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 CD24P25063 80 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
HDAC6-213ENST00000462730 ADIRFQ15847 76 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 DYNAPQ8N1N2 210 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 HIST1H2BLQ99880 126 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 SRD5A3Q9H8P0 318 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 NBR2O15453 112 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 APELAP0DMC3 54 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 AREGP15514 252 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 OR10J1P30954 320 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 HES1Q14469 280 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 CCDC144NLQ6NUI1 221 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 OR4X1Q8NH49 305 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 CACNG8Q8WXS5 425 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 NDUFAF3Q9BU61 184 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 SLC45A2Q9UMX9 530 aa11.56□□□□□ -0.56
HDAC6-213ENST00000462730 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 FCN1O00602 326 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 DSCR9P59020 149 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 TMEM241Q24JQ0 296 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 CLEC12BQ2HXU8 276 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 C16orf82Q7Z2V1 217 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 EAF1Q96JC9 268 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-213ENST00000462730 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-213ENST00000462730 NAV3Q8IVL0 2385 aa11.55□□□□□ -0.56
HDAC6-213ENST00000462730 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 TEX22C9J3V5 150 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 TCAPO15273 167 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PFN1P07737 140 aaKnown RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 LINC00869P0C866 280 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PSMB3P49720 205 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 SSBP2P81877 361 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PRR20EP86478 221 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PRR20CP86479 221 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PRR20DP86480 221 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PRR20BP86481 221 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 PRR20AP86496 221 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 C19orf35Q6ZS72 473 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 GATAD1Q8WUU5 269 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 MANBALQ9NQG1 85 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 CENPEQ02224 2701 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 TMEM250H0YL14 139 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 UBE2E1P51965 193 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 C21orf62-AS1Q17RA5 79 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 NPBQ8NG41 125 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 RPUSD4Q96CM3 377 aaKnown RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 MISP3Q96FF7 219 aa11.54□□□□□ -0.56
HDAC6-213ENST00000462730 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
HDAC6-213ENST00000462730 DOPEY2Q9Y3R5 2298 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 NDUFA3O95167 84 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 CNIH1O95406 144 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 MFAP2P55001 183 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
HDAC6-213ENST00000462730 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
HDAC6-213ENST00000462730 POLQO75417 2590 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 IGHV3-48P01763 117 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 SLC25A16P16260 332 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 RHOBP62745 196 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 SPATA31B1PQ5VZV4 182 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 PVRIGQ6DKI7 326 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 PARLQ9H300 379 aa11.52□□□□□ -0.56
HDAC6-213ENST00000462730 A8MWP6 167 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 H7BYZ3 331 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-213ENST00000462730 GALR1P47211 349 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 PAX8Q06710 450 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 COTL1Q14019 142 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 C5orf64Q2M2E5 130 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 OR1P1Q8NH06 330 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 NPIPB3Q92617 1050 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 OR5B12Q96R08 314 aa11.52□□□□□ -0.57
HDAC6-213ENST00000462730 PAGE4O60829 102 aa11.51□□□□□ -0.57
HDAC6-213ENST00000462730 FAM3BP58499 235 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms