RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CHEK1O14757 476 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
ERCC3-206ENST00000462306 CD81P60033 236 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 ASCL2Q99929 193 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 TSPAN4O14817 238 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 OR10J1P30954 320 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 GPX4P36969 197 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 YPEL3P61236 119 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 IAH1Q2TAA2 248 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 ZBTB8BQ8NAP8 495 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-206ENST00000462306 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 RNF2Q99496 336 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
ERCC3-206ENST00000462306 IGHV3OR16-13A0A075B7E8 117 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 IGHV3-74A0A0B4J1X5 117 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 PRSS46E5RG02 174 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 APOHP02749 345 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-206ENST00000462306 IL5P05113 134 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-206ENST00000462306 RAB11AP62491 216 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 GAMTQ14353 236 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 NRARPQ7Z6K4 114 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 C12orf45Q8N5I9 185 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-206ENST00000462306 ENKURQ8TC29 256 aa11.87□□□□□ -0.51
ERCC3-206ENST00000462306 CCSO14618 274 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
ERCC3-206ENST00000462306 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 LILRB2Q8N423 598 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
ERCC3-206ENST00000462306 WFDC10AQ9H1F0 79 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 VSIRQ9H7M9 311 aa11.86□□□□□ -0.51
ERCC3-206ENST00000462306 PAIP2BQ9ULR5 123 aaKnown RBP11.86□□□□□ -0.51
ERCC3-206ENST00000462306 IGKV1D-37A0A075B6S9 117 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 OR11H12B2RN74 326 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 H3BP45 60 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 NPPCP23582 126 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 CRYBB3P26998 211 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 PAX9P55771 341 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 FAM90A2PQ658T7 463 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 Q8WTZ3 238 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 ST8SIA2Q92186 375 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 SMIM8Q96KF7 97 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 GSKIPQ9P0R6 139 aa11.85□□□□□ -0.51
ERCC3-206ENST00000462306 STRAPQ9Y3F4 350 aaKnown RBP11.85□□□□□ -0.51
ERCC3-206ENST00000462306 SSSCA1O60232 199 aa11.84□□□□□ -0.51
ERCC3-206ENST00000462306 MBPP02686 304 aaPredicted RBP11.84□□□□□ -0.51
ERCC3-206ENST00000462306 LINC00322Q6ZN03 302 aaPredicted RBP11.84□□□□□ -0.51
ERCC3-206ENST00000462306 SLC35E1Q96K37 410 aa11.84□□□□□ -0.51
ERCC3-206ENST00000462306 TUBA4BQ9H853 241 aa11.84□□□□□ -0.51
ERCC3-206ENST00000462306 PSENENQ9NZ42 101 aa11.84□□□□□ -0.51
ERCC3-206ENST00000462306 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
ERCC3-206ENST00000462306 IGHV3-66A0A0C4DH42 116 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 SCGB1D2O95969 90 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 TOMM40O96008 361 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 RD3LP0DJH9 198 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 PSG1P11464 419 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 DEFA1P59665 94 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 DEFA3P59666 94 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 METTL26Q96S19 204 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 RAB40CQ96S21 281 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 U3KQE9 123 aa11.83□□□□□ -0.52
ERCC3-206ENST00000462306 IGKV1OR2-108A0A075B7D4 117 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 C5orf51A6NDU8 294 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 OR4C46A6NHA9 309 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 PMS2P5A8MQ11 134 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 INMT-MINDY4F8WBC2 141 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 DFFBO76075 338 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 IL4P05112 153 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 BMI1P35226 326 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-206ENST00000462306 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 MARVELD1Q9BSK0 173 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 SRD5A3Q9H8P0 318 aa11.82□□□□□ -0.52
ERCC3-206ENST00000462306 C7orf66A4D0T2 115 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 RBMY1BA6NDE4 496 aaKnown RBP11.81□□□□□ -0.52
ERCC3-206ENST00000462306 RBMY1EA6NEQ0 496 aaKnown RBP11.81□□□□□ -0.52
ERCC3-206ENST00000462306 ZFP92A6NM28 416 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 CCNKO75909 580 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 CD5P06127 495 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 RBMY1DP0C7P1 496 aaKnown RBP11.81□□□□□ -0.52
ERCC3-206ENST00000462306 TAS2R30P59541 319 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 ZNF90Q03938 601 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 IL15RAQ13261 267 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 HAGHQ16775 308 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms