RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 HOXD3P31249 432 aaPredicted RBP7.83□□□□□ -1.16
UPF2-204ENST00000460569 S100A11P31949 105 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 SLURP1P55000 103 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 CLINT1Q14677 625 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 RPEL1Q2QD12 228 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 SPSB3Q6PJ21 355 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 OR5C1Q8NGR4 320 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 AQP10Q96PS8 301 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 CHRDL1Q9BU40 450 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 TMEM147Q9BVK8 224 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 SMIM3Q9BZL3 60 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 UQCC1Q9NVA1 299 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 TNFSF18Q9UNG2 199 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
UPF2-204ENST00000460569 TRAV30A0A087WSZ9 112 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 IGHV3-35A0A0C4DH35 117 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 UBE2L5PA0A1B0GUS4 154 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 RNF222A6NCQ9 220 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 ZFP92A6NM28 416 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 FNDC10F2Z333 226 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 OR2C1O95371 312 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 CTSGP08311 255 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 IGLC1P0CG04 106 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 ADMP35318 185 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 MYCNOSP40205 109 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 AP2S1P53680 142 aaPredicted RBP7.82□□□□□ -1.16
UPF2-204ENST00000460569 CD300CQ08708 224 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 FHL3Q13643 280 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 ATP6V1FQ16864 119 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 TIGITQ495A1 244 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 TMEM144Q7Z5S9 345 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 OR11H4Q8NGC9 324 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 SPATA3Q8NHX4 192 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 GGACTQ9BVM4 153 aa7.82□□□□□ -1.16
UPF2-204ENST00000460569 IGKV1-17P01599 117 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 C1QBP02746 253 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
UPF2-204ENST00000460569 TEPPQ6URK8 271 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 TREML4Q6UXN2 200 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 ATP5SQ99766 215 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 MFFQ9GZY8 342 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 NPVFQ9HCQ7 196 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 FBXL17Q9UF56 701 aa7.81□□□□□ -1.16
UPF2-204ENST00000460569 IGKV1D-37A0A075B6S9 117 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 IGKV1OR2-108A0A075B7D4 117 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 HMSDA8MTL9 139 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 DFFBO76075 338 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 YIF1AO95070 293 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 FABP1P07148 127 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 FGF7P21781 194 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 SYNJ2BPP57105 145 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 VWC2Q2TAL6 325 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 FAM106AQ4KMX7 169 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 ZNF600Q6ZNG1 722 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 C1QL4Q86Z23 238 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
UPF2-204ENST00000460569 TRGV9Q99603 122 aa7.8□□□□□ -1.16
UPF2-204ENST00000460569 PUS1Q9Y606 427 aaKnown RBP eCLIP7.8□□□□□ -1.16
UPF2-204ENST00000460569 IGHV3OR16-8A0A075B7F1 116 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 ZNF320A2RRD8 509 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 NDUFA4O00483 81 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 PFDN1O60925 122 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 TOMM40O96008 361 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 IFNA5P01569 189 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 EIF2B2P49770 351 aaKnown RBP7.79□□□□□ -1.16
UPF2-204ENST00000460569 YPEL3P61236 119 aaPredicted RBP7.79□□□□□ -1.16
UPF2-204ENST00000460569 ZNF90Q03938 601 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 OR2F1Q13607 317 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 ZNF345Q14585 488 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 BTNL8Q6UX41 500 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 CYP2G1PQ6ZSU1 146 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 GPHB5Q86YW7 130 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 LINC00482Q8N8I6 264 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 TMEM190Q8WZ59 177 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
UPF2-204ENST00000460569 C20orf24Q9BUV8 137 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
UPF2-204ENST00000460569 LSM4Q9Y4Z0 139 aaKnown RBP7.79□□□□□ -1.16
UPF2-204ENST00000460569 OVOL1O14753 267 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 AGPAT2O15120 278 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 RD3LP0DJH9 198 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 PSG1P11464 419 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 CXCL2P19875 107 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 CD33P20138 364 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 CAMLGP49069 296 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 LYZP61626 148 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 RAB31Q13636 194 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
UPF2-204ENST00000460569 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 REC114Q7Z4M0 266 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 KCNRGQ8N5I3 272 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 BPIFCQ8NFQ6 507 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 OR51G1Q8NGK1 321 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 Q8WTZ3 238 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 ZNF414Q96IQ9 312 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 HYLS1Q96M11 299 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms