RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 KIR2DL5BQ8NHK3 375 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 IGKV1-17P01599 117 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 VAMP1P23763 118 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 TNFRSF9Q07011 255 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 SPANXN2Q5MJ10 180 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 PRSS54Q6PEW0 395 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 LILRB2Q8N423 598 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 MS4A6AQ9H2W1 248 aa14.87□□□□□ -0.03
LRCH3-208ENST00000443727 TENM2Q9NT68 2774 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 OR10J1P30954 320 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 ZNF79Q15937 498 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 ZNF124Q15973 351 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 TMEM128Q5BJH2 165 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 CCDC190Q86UF4 302 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 DTD1Q8TEA8 209 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 Q8WTZ3 238 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 ACY3Q96HD9 319 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 GRAMD2BQ96HH9 432 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 RBKSQ9H477 322 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 MAP6D1Q9H9H5 199 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 HSPB7Q9UBY9 170 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 RABAC1Q9UI14 185 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 TP53TG1Q9Y2A0 90 aa14.86□□□□□ -0.03
LRCH3-208ENST00000443727 LCE6AA0A183 80 aa14.85□□□□□ -0.03
LRCH3-208ENST00000443727 ZNF701M0R085 212 aaPredicted RBP14.85□□□□□ -0.03
LRCH3-208ENST00000443727 INPP1P49441 399 aa14.85□□□□□ -0.03
LRCH3-208ENST00000443727 DEDD2Q8WXF8 326 aa14.85□□□□□ -0.03
LRCH3-208ENST00000443727 SLC25A21Q9BQT8 299 aaPredicted RBP14.85□□□□□ -0.03
LRCH3-208ENST00000443727 RBM38Q9H0Z9 239 aaKnown RBP14.85□□□□□ -0.03
LRCH3-208ENST00000443727 U3KQ87 197 aa14.85□□□□□ -0.03
LRCH3-208ENST00000443727 IFNA4P05014 189 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 IGLC1P0CG04 106 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 CRYBB3P26998 211 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 P2RY1P47900 373 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 STXBP6Q8NFX7 210 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 TMEM170AQ8WVE7 144 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 NPIPB3Q92617 1050 aa14.84□□□□□ -0.03
LRCH3-208ENST00000443727 DYNC2H1Q8NCM8 4307 aaKnown RBP14.84□□□□□ -0.03
LRCH3-208ENST00000443727 YPEL3P61236 119 aaPredicted RBP14.83□□□□□ -0.04
LRCH3-208ENST00000443727 RNF183Q96D59 192 aa14.83□□□□□ -0.04
LRCH3-208ENST00000443727 CSTL1Q9H114 145 aa14.83□□□□□ -0.04
LRCH3-208ENST00000443727 CSMD3Q7Z407 3707 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 TRAV2A0A0B4J234 112 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 A0A0J9YWU9 116 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 DUXBA0A1W2PPF3 345 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 MPTX1A8MV57 137 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 EIF2B2P49770 351 aaKnown RBP14.82□□□□□ -0.04
LRCH3-208ENST00000443727 DEFB131AP59861 70 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 TRIQKQ629K1 86 aa14.82□□□□□ -0.04
LRCH3-208ENST00000443727 HNRNPCP07910 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
LRCH3-208ENST00000443727 RD3LP0DJH9 198 aa14.81□□□□□ -0.04
LRCH3-208ENST00000443727 ATP5IP56385 69 aaPredicted RBP14.81□□□□□ -0.04
LRCH3-208ENST00000443727 RBMS2Q15434 407 aaKnown RBP14.81□□□□□ -0.04
LRCH3-208ENST00000443727 LEMD1Q68G75 181 aa14.81□□□□□ -0.04
LRCH3-208ENST00000443727 LYG2Q86SG7 212 aa14.81□□□□□ -0.04
LRCH3-208ENST00000443727 CENPSQ8N2Z9 138 aa14.81□□□□□ -0.04
LRCH3-208ENST00000443727 HELTA6NFD8 242 aa14.8□□□□□ -0.04
LRCH3-208ENST00000443727 JTBO76095 146 aa14.8□□□□□ -0.04
LRCH3-208ENST00000443727 IL4P05112 153 aa14.8□□□□□ -0.04
LRCH3-208ENST00000443727 PPP1R1AQ13522 171 aa14.8□□□□□ -0.04
LRCH3-208ENST00000443727 SRRQ9GZT4 340 aa14.8□□□□□ -0.04
LRCH3-208ENST00000443727 PAIP2BQ9ULR5 123 aaKnown RBP14.8□□□□□ -0.04
LRCH3-208ENST00000443727 STARD9Q9P2P6 4700 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 CXorf65A6NEN9 183 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 SFT2D2O95562 160 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 FAM24BQ8N5W8 94 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 LRTM2Q8N967 370 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 SLC35E1Q96K37 410 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 TMED3Q9Y3Q3 217 aa14.79□□□□□ -0.04
LRCH3-208ENST00000443727 MED6O75586 246 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 TOMM40O96008 361 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 IAPPP10997 89 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 AP2S1P53680 142 aaPredicted RBP14.78□□□□□ -0.04
LRCH3-208ENST00000443727 RAB11AP62491 216 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 PMS2P11Q13670 270 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 STHQ8IWL8 128 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 TMEM217Q8N7C4 229 aa14.78□□□□□ -0.04
LRCH3-208ENST00000443727 LINC00854A0A1B0GVQ3 168 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 NAP1L6A6NFF2 107 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 ZFP92A6NM28 416 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 K7EQG2 157 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 PITX3O75364 302 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 CA1P00915 261 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-208ENST00000443727 HOXB5P09067 269 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 ZNF688P0C7X2 276 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 SLC25A6P12236 298 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 GPX4P36969 197 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-208ENST00000443727 DHRS2Q13268 280 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 USF2Q15853 346 aaPredicted RBP14.77□□□□□ -0.05
LRCH3-208ENST00000443727 GATAD1Q8WUU5 269 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 U3KQE9 123 aa14.77□□□□□ -0.05
LRCH3-208ENST00000443727 FAM90A26D6RGX4 464 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 PSG1P11464 419 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 RPP30P78346 268 aaKnown RBP14.76□□□□□ -0.05
LRCH3-208ENST00000443727 BAK1Q16611 211 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 C16orf54Q6UWD8 224 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 OR51G1Q8NGK1 321 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 RARRES2Q99969 163 aa14.76□□□□□ -0.05
LRCH3-208ENST00000443727 PBDC1Q9BVG4 233 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms