RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 APRG1Q8IVJ8 170 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 HSPB7Q9UBY9 170 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 U3KQ87 197 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 KIR2DL5BA0A0G2JN68 375 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 KIR2DL5BA0A0G2JPC4 375 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 DFFBO76075 338 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
NUP50-208ENST00000430547 OR10J1P30954 320 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 DEFB135Q30KP9 77 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 PRSS54Q6PEW0 395 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 Q6ZWC4 215 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 WFDC3Q8IUB2 231 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 KIR2DL5AQ8N109 375 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 KIR2DL5BQ8NHK3 375 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 Q8WTZ3 238 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 GRAMD2BQ96HH9 432 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 RBKSQ9H477 322 aa13.04□□□□□ -0.32
NUP50-208ENST00000430547 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 TRIQKQ629K1 86 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 RABAC1Q9UI14 185 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 TP53TG1Q9Y2A0 90 aa13.03□□□□□ -0.32
NUP50-208ENST00000430547 SPRY2O43597 315 aa13.02□□□□□ -0.33
NUP50-208ENST00000430547 IFNA4P05014 189 aa13.02□□□□□ -0.33
NUP50-208ENST00000430547 IGLC1P0CG04 106 aa13.02□□□□□ -0.33
NUP50-208ENST00000430547 EIF2B2P49770 351 aaKnown RBP13.02□□□□□ -0.33
NUP50-208ENST00000430547 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.33
NUP50-208ENST00000430547 SRRQ9GZT4 340 aa13.02□□□□□ -0.33
NUP50-208ENST00000430547 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 CRYBB3P26998 211 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 P2RY1P47900 373 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
NUP50-208ENST00000430547 ZNF124Q15973 351 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 STXBP6Q8NFX7 210 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 TMEM170AQ8WVE7 144 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
NUP50-208ENST00000430547 RYR3Q15413 4870 aa13□□□□□ -0.33
NUP50-208ENST00000430547 HNRNPCP07910 306 aaKnown RBP eCLIP13□□□□□ -0.33
NUP50-208ENST00000430547 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
NUP50-208ENST00000430547 PPP1R1AQ13522 171 aa13□□□□□ -0.33
NUP50-208ENST00000430547 LRTM2Q8N967 370 aa13□□□□□ -0.33
NUP50-208ENST00000430547 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
NUP50-208ENST00000430547 NAP1L6A6NFF2 107 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 MED6O75586 246 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 SFT2D2O95562 160 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 IL4P05112 153 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 DEFB131AP59861 70 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 CSTL1Q9H114 145 aa12.99□□□□□ -0.33
NUP50-208ENST00000430547 LCE6AA0A183 80 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 HELTA6NFD8 242 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 CENPXA8MT69 81 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 MPTX1A8MV57 137 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 FAM90A26D6RGX4 464 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 TOMM40O96008 361 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 SLC25A6P12236 298 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
NUP50-208ENST00000430547 RAB11AP62491 216 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 LEMD1Q68G75 181 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 LYG2Q86SG7 212 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 RNF183Q96D59 192 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 PAIP2BQ9ULR5 123 aaKnown RBP12.98□□□□□ -0.33
NUP50-208ENST00000430547 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
NUP50-208ENST00000430547 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 PITX3O75364 302 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 HOXB5P09067 269 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 IAPPP10997 89 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 AP2S1P53680 142 aaPredicted RBP12.97□□□□□ -0.33
NUP50-208ENST00000430547 RPP30P78346 268 aaKnown RBP12.97□□□□□ -0.33
NUP50-208ENST00000430547 BAK1Q16611 211 aa12.97□□□□□ -0.33
NUP50-208ENST00000430547 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
NUP50-208ENST00000430547 LINC00854A0A1B0GVQ3 168 aa12.96□□□□□ -0.33
NUP50-208ENST00000430547 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.33
NUP50-208ENST00000430547 USF2Q15853 346 aaPredicted RBP12.96□□□□□ -0.33
NUP50-208ENST00000430547 STHQ8IWL8 128 aa12.96□□□□□ -0.33
NUP50-208ENST00000430547 K7EQG2 157 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 JTBO76095 146 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 NDUFB6O95139 128 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 CA1P00915 261 aaPredicted RBP12.95□□□□□ -0.34
NUP50-208ENST00000430547 FABP1P07148 127 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 ZNF688P0C7X2 276 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 PSG1P11464 419 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
NUP50-208ENST00000430547 DHRS2Q13268 280 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 FAM24BQ8N5W8 94 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 TMEM217Q8N7C4 229 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 OR51G1Q8NGK1 321 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 GATAD1Q8WUU5 269 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms