RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CDS2O95674 445 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 TRGC2P03986 189 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 BPGMP07738 259 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 ZNF728P0DKX0 622 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 CD24P25063 80 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 COL8A2P25067 703 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 FKBP2P26885 142 aaKnown RBP1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 S100A11P31949 105 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 RPL28P46779 137 aaKnown RBP1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 SRP9P49458 86 aaKnown RBP1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 BIKQ13323 160 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR8B8Q15620 311 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 RTL8BQ17RB0 113 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 AMMECR1LQ6DCA0 310 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 MIR17HGQ75NE6 70 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 ANGPTL5Q86XS5 388 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR8J3Q8NGG0 315 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 BORCS8Q96FH0 119 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 RTL8AQ9BWD3 113 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 OTORQ9NRC9 128 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 TXNL4BQ9NX01 149 aaKnown RBP1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 LAMTOR3Q9UHA4 124 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 MED31Q9Y3C7 131 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 COL1A2P08123 1366 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 NCOA3Q9Y6Q9 1424 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 CPAMD8Q8IZJ3 1885 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 MYO16Q9Y6X6 1858 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 ANAPC1Q9H1A4 1944 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 IGKV1D-17A0A075B6S4 117 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A087X0T9 212 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A1B0GX51 115 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TRDV1A0A1B0GX56 115 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 ODAMA1E959 279 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 EFCAB10A6NFE3 127 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TLCD2A6NGC4 264 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 C11orf86A6NJI1 115 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TMEM256-PLSCR3K7ERE1 68 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 BCL9O00512 1426 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TP53I11O14683 189 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 FAM107AO95990 144 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 BCL2P10415 239 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 DEFA4P12838 97 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 RNASE4P34096 147 aaKnown RBP1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 SRP14P37108 136 aaKnown RBP1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 YPEL3P61236 119 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 EIF5AP63241 154 aaKnown RBP1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 SLC38A11Q08AI6 406 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 MSMO1Q15800 293 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 DEFB134Q4QY38 66 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 BRMS1LQ5PSV4 323 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 PRR9Q5T870 116 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 C1orf140Q5VVS0 124 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 AGTRAPQ6RW13 159 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TRAPPC6BQ86SZ2 158 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 CROCCP2Q86T23 111 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 LHFPL1Q86WI0 220 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 PRR15Q8IV56 129 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 FANCMQ8IYD8 2048 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 HIST3H2BBQ8N257 126 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 ANKRD31Q8N7Z5 1873 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TMEM229BQ8NBD8 167 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 Q8NDZ9 215 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR51T1Q8NGJ9 327 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 SHROOM3Q8TF72 1996 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 ISOC1Q96CN7 298 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 SCGB3A1Q96QR1 104 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 PFDN5Q99471 154 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TSC22D3Q99576 134 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 SLC25A21Q9BQT8 299 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 YIPF3Q9GZM5 350 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 TMEM126AQ9H061 195 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 DUSP21Q9H596 190 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 LAMTOR2Q9Y2Q5 125 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 RNF11Q9Y3C5 154 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 FAM215AQ9Y5M1 114 aa1.53□□□□□ -2.16
HMGB1P9-201ENST00000429856 FER1L6Q2WGJ9 1857 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 TOPBP1Q92547 1522 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 SOGA1O94964 1423 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 CD109Q6YHK3 1445 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 SPATA31E1Q6ZUB1 1445 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 BORCS7-ASMTA0A0B4J1R7 106 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 TMEM189A5PLL7 270 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 TMEM235A6NFC5 223 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 TMEM212A6NML5 194 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 GABARAPH6UMI1 98 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 OVOL1O14753 267 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 GNRH2O43555 120 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 CREBL2O60519 120 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 IGKV1-17P01599 117 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 CXCL1P09341 107 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 SDC4P31431 198 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 EIF2B2P49770 351 aaKnown RBP1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 UBE2BP63146 152 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 SUPT4H1P63272 117 aaKnown RBP1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 PLCXD2Q0VAA5 305 aa1.52□□□□□ -2.17
HMGB1P9-201ENST00000429856 IGFBP7Q16270 282 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms