RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 PMS2P5A8MQ11 134 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 CCSO14618 274 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 CHEK1O14757 476 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 ATP5IP56385 69 aaPredicted RBP13.03□□□□□ -0.32
CTSD-203ENST00000429746 POLR2GP62487 172 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTSD-203ENST00000429746 FAM90A2PQ658T7 463 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 LINC00322Q6ZN03 302 aaPredicted RBP13.03□□□□□ -0.32
CTSD-203ENST00000429746 SBSPONQ8IVN8 264 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 ZBTB8BQ8NAP8 495 aaPredicted RBP13.03□□□□□ -0.32
CTSD-203ENST00000429746 VSIRQ9H7M9 311 aa13.03□□□□□ -0.32
CTSD-203ENST00000429746 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
CTSD-203ENST00000429746 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 TRAV25A0A0B4J276 109 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 RPS10-NUDT3A0A1W2PQS6 291 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 IL15RAQ13261 267 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 GAMTQ14353 236 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 NPIPB3Q92617 1050 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 RNF2Q99496 336 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 C11orf1Q9H5F2 150 aa13.02□□□□□ -0.33
CTSD-203ENST00000429746 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 WRBO00258 174 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 TSPAN4O14817 238 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 IL5P05113 134 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 IAH1Q2TAA2 248 aaPredicted RBP13.01□□□□□ -0.33
CTSD-203ENST00000429746 MZT2BQ6NZ67 158 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 U3KQE9 123 aa13.01□□□□□ -0.33
CTSD-203ENST00000429746 IGHV3OR16-13A0A075B7E8 117 aa13□□□□□ -0.33
CTSD-203ENST00000429746 IGHV3-74A0A0B4J1X5 117 aa13□□□□□ -0.33
CTSD-203ENST00000429746 H3BP45 60 aa13□□□□□ -0.33
CTSD-203ENST00000429746 MED6O75586 246 aa13□□□□□ -0.33
CTSD-203ENST00000429746 YIF1AO95070 293 aa13□□□□□ -0.33
CTSD-203ENST00000429746 OR10J1P30954 320 aa13□□□□□ -0.33
CTSD-203ENST00000429746 GPX4P36969 197 aaPredicted RBP13□□□□□ -0.33
CTSD-203ENST00000429746 NKX2-1P43699 371 aaPredicted RBP13□□□□□ -0.33
CTSD-203ENST00000429746 CD81P60033 236 aa13□□□□□ -0.33
CTSD-203ENST00000429746 YPEL3P61236 119 aaPredicted RBP13□□□□□ -0.33
CTSD-203ENST00000429746 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
CTSD-203ENST00000429746 ST8SIA2Q92186 375 aa13□□□□□ -0.33
CTSD-203ENST00000429746 CIB3Q96Q77 187 aaPredicted RBP13□□□□□ -0.33
CTSD-203ENST00000429746 CITED4Q96RK1 184 aa13□□□□□ -0.33
CTSD-203ENST00000429746 ASCL2Q99929 193 aa13□□□□□ -0.33
CTSD-203ENST00000429746 TRAV30A0A087WSZ9 112 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 TRAV14DV4A0A0A6YYC5 116 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 CCNKO75909 580 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 IFNA21P01568 189 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
CTSD-203ENST00000429746 CRYBB3P26998 211 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 GUCA2BQ16661 112 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 ETFRF1Q6IPR1 90 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 C12orf45Q8N5I9 185 aaPredicted RBP12.99□□□□□ -0.33
CTSD-203ENST00000429746 ACY3Q96HD9 319 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
CTSD-203ENST00000429746 IFNA4P05014 189 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
CTSD-203ENST00000429746 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 TMEM14EPQ6UXP3 125 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 GTSCR1Q86UQ5 136 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 DEFB125Q8N687 156 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
CTSD-203ENST00000429746 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
CTSD-203ENST00000429746 RBMY1BA6NDE4 496 aaKnown RBP12.97□□□□□ -0.33
CTSD-203ENST00000429746 RBMY1EA6NEQ0 496 aaKnown RBP12.97□□□□□ -0.33
CTSD-203ENST00000429746 SSSCA1O60232 199 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 TOMM40O96008 361 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 RBMY1DP0C7P1 496 aaKnown RBP12.97□□□□□ -0.33
CTSD-203ENST00000429746 ZNF90Q03938 601 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 TM2D3Q9BRN9 247 aa12.97□□□□□ -0.33
CTSD-203ENST00000429746 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
CTSD-203ENST00000429746 C7orf66A4D0T2 115 aa12.96□□□□□ -0.33
CTSD-203ENST00000429746 PSG1P11464 419 aa12.96□□□□□ -0.33
CTSD-203ENST00000429746 ARL16Q0P5N6 197 aa12.96□□□□□ -0.33
CTSD-203ENST00000429746 GINS3Q9BRX5 216 aa12.96□□□□□ -0.33
CTSD-203ENST00000429746 OR11H12B2RN74 326 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 C3orf84H3BNL1 204 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 RAB11AP62491 216 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 TMEM182Q6ZP80 229 aaPredicted RBP12.95□□□□□ -0.34
CTSD-203ENST00000429746 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
CTSD-203ENST00000429746 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
CTSD-203ENST00000429746 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
CTSD-203ENST00000429746 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 INMT-MINDY4F8WBC2 141 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 K7EPK0 472 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 DFFBO76075 338 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 TAS2R30P59541 319 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 HAGHQ16775 308 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 SLC35E1Q96K37 410 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 C2orf50Q96LR7 162 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 RAB40CQ96S21 281 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 TRGV9Q99603 122 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 ZMAT4Q9H898 229 aa12.94□□□□□ -0.34
CTSD-203ENST00000429746 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms