RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SRSF1Q07955 248 aaKnown RBP eCLIP17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 FAM167A-AS1Q96KT0 104 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 ZNF355PQ9NSJ1 428 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 ZFYVE26Q68DK2 2539 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 FAM106CPP0CH98 169 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 OR5AU1Q8NGC0 362 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 CENPVL3A0A0U1RRI6 287 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 ORM2P19652 201 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 OR5T1Q8NG75 326 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 OR1B1Q8NGR6 318 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 C2CD4CQ8TF44 421 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 TMEM242Q9NWH2 141 aa17.23■□□□□ 0.35
CNEP1R1-202ENST00000427478 A1L4Q6 167 aa17.22■□□□□ 0.35
CNEP1R1-202ENST00000427478 CLDN34H7C241 214 aa17.22■□□□□ 0.35
CNEP1R1-202ENST00000427478 CXCL1P09341 107 aa17.22■□□□□ 0.35
CNEP1R1-202ENST00000427478 PAX8Q06710 450 aa17.22■□□□□ 0.35
CNEP1R1-202ENST00000427478 C16orf82Q7Z2V1 217 aa17.22■□□□□ 0.35
CNEP1R1-202ENST00000427478 IGHV3OR16-10A0A075B7F0 116 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 BRS3P32247 399 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 UBE2L3P68036 154 aaKnown RBP17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 KLF17Q5JT82 389 aaPredicted RBP17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 ASPHD1Q5U4P2 390 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 CTDSP1Q9GZU7 261 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 ARL2-SNX15V9GYD0 113 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 C1orf196B1AJZ1 125 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 LINC00305Q7Z4B0 112 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 AURKAIP1Q9NWT8 199 aaPredicted RBP17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 SVEP1Q4LDE5 3571 aa17.21■□□□□ 0.35
CNEP1R1-202ENST00000427478 VPS13CQ709C8 3753 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 PGPEP1LA6NFU8 196 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 K7EIM0 57 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGLC1P0CG04 106 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 COX6B1P14854 86 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 RAB5BP61020 215 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 Q8N9W7 124 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 PRELID1Q9Y255 219 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 CSMD1Q96PZ7 3565 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 ZNF462Q96JM2 2506 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 PYYP10082 97 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 LINC01551Q86U37 167 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 OR1L6Q8NGR2 347 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 C1RLQ9NZP8 487 aa17.2■□□□□ 0.34
CNEP1R1-202ENST00000427478 UTP20O75691 2785 aaKnown RBP17.19■□□□□ 0.34
CNEP1R1-202ENST00000427478 TRBV20OR9-2A0A075B6H5 130 aa17.19■□□□□ 0.34
CNEP1R1-202ENST00000427478 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
CNEP1R1-202ENST00000427478 C11orf52Q96A22 123 aa17.19■□□□□ 0.34
CNEP1R1-202ENST00000427478 RBM14Q96PK6 669 aaKnown RBP17.19■□□□□ 0.34
CNEP1R1-202ENST00000427478 NPIPB5A8MRT5 1133 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 TSPAN9O75954 239 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 TIGITQ495A1 244 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 PAXXQ9BUH6 204 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGHV7-81A0A0B4J1V7 117 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 GGTLC3B5MD39 225 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 RASL11BQ9BPW5 248 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
CNEP1R1-202ENST00000427478 TRAV40A0A0B4J280 105 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 RPS10P46783 165 aaKnown RBP17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 NECAP1Q8NC96 275 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 OR51M1Q9H341 326 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 S4R3C0 116 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 H7BYZ3 331 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 HYPMO75409 117 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 PSG1P11464 419 aa17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 SAV1Q9H4B6 383 aaPredicted RBP17.17■□□□□ 0.34
CNEP1R1-202ENST00000427478 A0A1W2PRE2 83 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 HNF1AP20823 631 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 CRYBB3P26998 211 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 TTC9CQ8N5M4 171 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 FANCD2OSQ96PS1 177 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 HSPB9Q9BQS6 159 aa17.16■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGLV11-55A0A075B6I3 123 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGHV1-69DA0A0B4J2H0 117 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGHV1-69P01742 117 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 LYZP61626 148 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 SUMO1P63165 101 aaKnown RBP17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 HLA-DRB1P01911 266 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 SNRPCP09234 159 aaKnown RBP17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 EGR2P11161 476 aaPredicted RBP17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 RPL35P42766 123 aaKnown RBP17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 PLP1P60201 277 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 ANAPC16Q96DE5 110 aa17.15■□□□□ 0.34
CNEP1R1-202ENST00000427478 IGKV1-17P01599 117 aa17.14■□□□□ 0.33
CNEP1R1-202ENST00000427478 FXYD5Q96DB9 178 aa17.14■□□□□ 0.33
CNEP1R1-202ENST00000427478 CRYBG3Q68DQ2 2970 aa17.14■□□□□ 0.33
CNEP1R1-202ENST00000427478 GALR1P47211 349 aa17.14■□□□□ 0.33
CNEP1R1-202ENST00000427478 ELOVL1Q9BW60 279 aa17.14■□□□□ 0.33
CNEP1R1-202ENST00000427478 UBR5O95071 2799 aaPredicted RBP17.13■□□□□ 0.33
CNEP1R1-202ENST00000427478 MSMBP08118 114 aa17.13■□□□□ 0.33
CNEP1R1-202ENST00000427478 OCC1Q8TAD7 63 aa17.13■□□□□ 0.33
CNEP1R1-202ENST00000427478 FAM210BQ96KR6 192 aa17.13■□□□□ 0.33
CNEP1R1-202ENST00000427478 OR5B12Q96R08 314 aa17.13■□□□□ 0.33
CNEP1R1-202ENST00000427478 LEMD1Q68G75 181 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 BIN3Q9NQY0 253 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 HIGD1AQ9Y241 93 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 RD3LP0DJH9 198 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 IGHV4-38-2P0DP08 117 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms