RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RBMS2Q15434 407 aaKnown RBP13.56□□□□□ -0.24
NUP50-207ENST00000424634 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
NUP50-207ENST00000424634 METTL26Q96S19 204 aa13.56□□□□□ -0.24
NUP50-207ENST00000424634 TRAV30A0A087WSZ9 112 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 TRAV2A0A0B4J234 112 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 RPS10-NUDT3A0A1W2PQS6 291 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 JTBO76095 146 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 DEFB131AP59861 70 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 PMS2P11Q13670 270 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 TRIM63Q969Q1 353 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 U3KQE9 123 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 V9GYH0 126 aa13.55□□□□□ -0.24
NUP50-207ENST00000424634 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 A0A1W2PS18 150 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 MPTX1A8MV57 137 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 SLC25A4P12235 298 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 P2RY1P47900 373 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 CCR6P51684 374 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 OR1S2Q8NGQ3 325 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 TMEM231Q9H6L2 316 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 HSPB7Q9UBY9 170 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 RABAC1Q9UI14 185 aa13.54□□□□□ -0.24
NUP50-207ENST00000424634 CXorf65A6NEN9 183 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 K7EQG2 157 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 NPY1RP25929 384 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 OR10J1P30954 320 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
NUP50-207ENST00000424634 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 ZNF79Q15937 498 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 RBKSQ9H477 322 aa13.53□□□□□ -0.24
NUP50-207ENST00000424634 ATF4P18848 351 aaPredicted RBP13.52□□□□□ -0.25
NUP50-207ENST00000424634 LGI3Q8N145 548 aa13.52□□□□□ -0.25
NUP50-207ENST00000424634 STXBP6Q8NFX7 210 aa13.52□□□□□ -0.25
NUP50-207ENST00000424634 Q8WTZ3 238 aa13.52□□□□□ -0.25
NUP50-207ENST00000424634 CACFD1Q9UGQ2 172 aa13.52□□□□□ -0.25
NUP50-207ENST00000424634 SCGB2A1O75556 95 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 IFNA10P01566 189 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
NUP50-207ENST00000424634 TMED4Q7Z7H5 227 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 TOMM5Q8N4H5 51 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 DTD1Q8TEA8 209 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 GATAD1Q8WUU5 269 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 ACY3Q96HD9 319 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 RARRES2Q99969 163 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 U3KQ87 197 aa13.51□□□□□ -0.25
NUP50-207ENST00000424634 PITX3O75364 302 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 ANXA3P12429 323 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 CEMP1Q6PRD7 247 aaPredicted RBP13.5□□□□□ -0.25
NUP50-207ENST00000424634 C16orf54Q6UWD8 224 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 GLMPQ8WWB7 406 aa13.5□□□□□ -0.25
NUP50-207ENST00000424634 RBM38Q9H0Z9 239 aaKnown RBP13.5□□□□□ -0.25
NUP50-207ENST00000424634 BIRC6Q9NR09 4857 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 CCDC160A6NGH7 325 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
NUP50-207ENST00000424634 HNRNPCP07910 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
NUP50-207ENST00000424634 GIG44P09565 113 aaPredicted RBP13.49□□□□□ -0.25
NUP50-207ENST00000424634 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
NUP50-207ENST00000424634 SRPXP78539 464 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 TMEM128Q5BJH2 165 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 GRAMD2BQ96HH9 432 aa13.49□□□□□ -0.25
NUP50-207ENST00000424634 NARS2Q96I59 477 aaKnown RBP13.49□□□□□ -0.25
NUP50-207ENST00000424634 KMT2AQ03164 3969 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 KNCNA6PVL3 124 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 TOMM40O96008 361 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 IL4P05112 153 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 ZNF688P0C7X2 276 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 RD3LP0DJH9 198 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 PSG1P11464 419 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 AP3S2P59780 193 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 OR1S1Q8NH92 325 aa13.48□□□□□ -0.25
NUP50-207ENST00000424634 NUPR2A6NF83 97 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 S100A5P33763 92 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 TRPT1Q86TN4 253 aaKnown RBP13.47□□□□□ -0.25
NUP50-207ENST00000424634 STHQ8IWL8 128 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 LRTM2Q8N967 370 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 LINC00476Q8WZB0 136 aa13.47□□□□□ -0.25
NUP50-207ENST00000424634 IGKV1D-37A0A075B6S9 117 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 BUB3O43684 328 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 IFNA4P05014 189 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 VAMP1P23763 118 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 DHRS2Q13268 280 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 GAMTQ14353 236 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
NUP50-207ENST00000424634 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
NUP50-207ENST00000424634 HELTA6NFD8 242 aa13.45□□□□□ -0.26
NUP50-207ENST00000424634 DEFB4AO15263 64 aa13.45□□□□□ -0.26
NUP50-207ENST00000424634 SFT2D2O95562 160 aa13.45□□□□□ -0.26
NUP50-207ENST00000424634 GPX4P36969 197 aaPredicted RBP13.45□□□□□ -0.26
NUP50-207ENST00000424634 ATP5IP56385 69 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms