RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 SAA1P0DJI8 122 aaPredicted RBP17.23■□□□□ 0.35
USP48-205ENST00000421625 OR1L8Q8NGR8 309 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 RND1Q92730 232 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 WASHC3Q9Y3C0 194 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 ARFGEF3Q5TH69 2177 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
USP48-205ENST00000421625 TRAV30A0A087WSZ9 112 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 KIR2DL2P43627 348 aaPredicted RBP17.23■□□□□ 0.35
USP48-205ENST00000421625 LRRC10Q5BKY1 277 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 PATE2Q6UY27 113 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 TAX1BP3O14907 124 aa17.22■□□□□ 0.35
USP48-205ENST00000421625 SSX8Q7RTT4 187 aa17.22■□□□□ 0.35
USP48-205ENST00000421625 CADP27708 2225 aa17.22■□□□□ 0.35
USP48-205ENST00000421625 HIST1H1EP10412 219 aaKnown RBP17.22■□□□□ 0.35
USP48-205ENST00000421625 ZNF714Q96N38 554 aa17.22■□□□□ 0.35
USP48-205ENST00000421625 IGHV1-24A0A0C4DH33 117 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 NUDT3O95989 172 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 E7EUB6 86 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 MZT1Q08AG7 82 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 GUSBP1Q15486 140 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 C10orf113Q5VZT2 155 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 LHFPL4Q7Z7J7 247 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 FXYD5Q96DB9 178 aa17.21■□□□□ 0.35
USP48-205ENST00000421625 TANC2Q9HCD6 1990 aa17.21■□□□□ 0.34
USP48-205ENST00000421625 CBY3A6NI87 242 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 SYS1-DBNDD2H3BUS1 97 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 IGLV1-44P01699 117 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 LINC00322Q6ZN03 302 aaPredicted RBP17.2■□□□□ 0.34
USP48-205ENST00000421625 C9orf106Q8NAJ2 232 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 MCRIP2Q9BUT9 160 aaKnown RBP17.2■□□□□ 0.34
USP48-205ENST00000421625 ST20Q9HBF5 79 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 RPH3ALQ9UNE2 315 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 OR2T8A6NH00 312 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 HES3Q5TGS1 186 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 SPRY3O43610 288 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 BVES-AS1Q5T3Y7 98 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 ATP5L2Q7Z4Y8 100 aa17.2■□□□□ 0.34
USP48-205ENST00000421625 MUC21A0A0G2JKD1 596 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 MUC21A0A140T8X8 626 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 DLL1O00548 723 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 CRXO43186 299 aaPredicted RBP17.19■□□□□ 0.34
USP48-205ENST00000421625 HBBP68871 147 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 MUC21Q5SSG8 566 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 FNDC4Q9H6D8 234 aaPredicted RBP17.19■□□□□ 0.34
USP48-205ENST00000421625 NAV3Q8IVL0 2385 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 PSG1P11464 419 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 CFHR2P36980 270 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 BOD1L1Q8NFC6 3051 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 ITLN1Q8WWA0 313 aa17.19■□□□□ 0.34
USP48-205ENST00000421625 ICE1Q9Y2F5 2266 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 RHOGP84095 191 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 LDLRAD2Q5SZI1 272 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 DEFB108BQ8NET1 73 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 BLNKQ8WV28 456 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 NPIPB3Q92617 1050 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 CHRDL1Q9BU40 450 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 FSTL3O95633 263 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 TMEM164Q5U3C3 297 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 GTSF1Q8WW33 167 aa17.18■□□□□ 0.34
USP48-205ENST00000421625 LEPROTL1O95214 131 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 LHBP01229 141 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 ZNF137PP52743 207 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 CACNG8Q8WXS5 425 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 PGLYRP4Q96LB8 373 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 MRPL36Q9P0J6 103 aaKnown RBP17.17■□□□□ 0.34
USP48-205ENST00000421625 INTS1Q8N201 2190 aaKnown RBP17.17■□□□□ 0.34
USP48-205ENST00000421625 LOC102724200A0A096LPH7 203 aaPredicted RBP17.17■□□□□ 0.34
USP48-205ENST00000421625 SLC25A5P05141 298 aaKnown RBP17.17■□□□□ 0.34
USP48-205ENST00000421625 SLC25A34Q6PIV7 304 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 C1orf162Q8NEQ5 155 aaPredicted RBP17.17■□□□□ 0.34
USP48-205ENST00000421625 FER1L6-AS2Q96M78 137 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 NDUFA4L2Q9NRX3 87 aa17.17■□□□□ 0.34
USP48-205ENST00000421625 MYCNOSP40205 109 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 ATP5IP56385 69 aaPredicted RBP17.16■□□□□ 0.34
USP48-205ENST00000421625 EPDR1Q9UM22 224 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 IGKV1D-37A0A075B6S9 117 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 H0Y8G0 127 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 MOSP00540 346 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 ZNF138P52744 262 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 C10orf55Q5SWW7 151 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 RPP21Q9H633 154 aaKnown RBP17.16■□□□□ 0.34
USP48-205ENST00000421625 ZNF430Q9H8G1 570 aaPredicted RBP17.16■□□□□ 0.34
USP48-205ENST00000421625 RAI1Q7Z5J4 1906 aaPredicted RBP17.16■□□□□ 0.34
USP48-205ENST00000421625 LINC00305Q7Z4B0 112 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 TMEM178AQ8NBL3 297 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 OR1L4Q8NGR5 311 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 CST9LQ9H4G1 147 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 C1RLQ9NZP8 487 aa17.16■□□□□ 0.34
USP48-205ENST00000421625 SLC25A48Q6ZT89 311 aaKnown RBP17.15■□□□□ 0.34
USP48-205ENST00000421625 DEFB125Q8N687 156 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 HARBI1Q96MB7 349 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 RAB9BQ9NP90 201 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 PGPA6NDG6 321 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 ERHP84090 104 aaKnown RBP17.15■□□□□ 0.34
USP48-205ENST00000421625 AMMECR1LQ6DCA0 310 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 FAM216BQ8N7L0 139 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 CCL13Q99616 98 aa17.15■□□□□ 0.34
USP48-205ENST00000421625 MRPL20Q9BYC9 149 aaKnown RBP17.15■□□□□ 0.34
USP48-205ENST00000421625 TCRBV4S1A1TA0A5B7 111 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms