RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MAS1LP35410 378 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SNCAP37840 140 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 RPL27AP46776 148 aaKnown RBP2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 LGALS7P47929 136 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SULT1A2P50226 295 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 RAB5CP51148 216 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 UBE2E1P51965 193 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SUB1P53999 127 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 RUNX1Q01196 453 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SSX2Q16385 188 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 DEFB113Q30KQ7 82 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM14EPQ6UXP3 125 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 LHFPL4Q7Z7J7 247 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 LRRC75A-AS1Q8N1F1 130 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF709Q8N972 641 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR2G3Q8NGZ4 309 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR2T10Q8NGZ9 312 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 OR2T6Q8NHC8 308 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 FAM213BQ8TBF2 198 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 C22orf15Q8WYQ4 148 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 BSCL2Q96G97 398 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SLC35E1Q96K37 410 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TBX15Q96SF7 602 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 RNF5Q99942 180 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 SH3BGRL3Q9H299 93 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 ZNF430Q9H8G1 570 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 WFDC1Q9HC57 220 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 MMP26Q9NRE1 261 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 KCNIP2Q9NS61 270 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TMEM14BQ9NUH8 114 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 TLN1Q9Y490 2541 aaKnown RBP2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
HMGB3P20-201ENST00000417997 PKD1L2Q7Z442 2459 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 ABCA4P78363 2273 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV3OR16-10A0A075B7F0 116 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV1-69DA0A0B4J2H0 117 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 TEX50A0A1B0GTY4 177 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 NCBP2LA6PVI3 153 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SRRM4A7MD48 611 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 LY6LH3BQJ8 138 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 TRIM77I1YAP6 450 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 CORTO00230 105 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 CYB5BO43169 146 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 FGF16O43320 207 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 MPDU1O75352 247 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 TSPAN9O75954 239 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 CA2P00918 260 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGLV2-23P01705 113 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 IGHV1-69P01742 117 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 HBE1P02100 147 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPP1P10451 314 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 CNTFRP26992 372 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SAA4P35542 130 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 OPRK1P41145 380 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 VDAC2P45880 294 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATP5IP56385 69 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 DLK1P80370 383 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PAX2Q02962 417 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 RAB31Q13636 194 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PSG5Q15238 335 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PRSS8Q16651 343 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 LRRC75BQ2VPJ9 315 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 AARDQ4LEZ3 155 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PDLIM3Q53GG5 364 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 C10orf55Q5SWW7 151 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 HCP5Q6MZN7 132 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 IL34Q6ZMJ4 242 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SLC16A13Q7RTY0 426 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 HSD17B13Q7Z5P4 300 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PPP1R27Q86WC6 154 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 LFNGQ8NES3 379 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 RBMXL1Q96E39 390 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 MALSU1Q96EH3 234 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SAT2Q96F10 170 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 NARS2Q96I59 477 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PYGO2Q9BRQ0 406 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PSMG3Q9BT73 122 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 RSG1Q9BU20 258 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PARD6GQ9BYG4 376 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 WDR61Q9GZS3 305 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 ARV1Q9H2C2 271 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 HRH4Q9H3N8 390 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 FBXL15Q9H469 300 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PARP11Q9NR21 331 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SIGLEC9Q9Y336 463 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 FBXO7Q9Y3I1 522 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 TIMM9Q9Y5J7 89 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 AUP1Q9Y679 476 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 SPENQ96T58 3664 aaKnown RBP2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PIEZO1Q92508 2521 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 CACNA1BQ00975 2339 aa2.97□□□□□ -1.93
HMGB3P20-201ENST00000417997 PKDREJQ9NTG1 2253 aa2.96□□□□□ -1.93
HMGB3P20-201ENST00000417997 ANKHD1Q8IWZ3 2542 aaKnown RBP2.96□□□□□ -1.93
HMGB3P20-201ENST00000417997 ATRXP46100 2492 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A087X002 238 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 CENPVL3A0A0U1RRI6 287 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A1B0GV50 99 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 A0A1B0GVY2 172 aa2.96□□□□□ -1.94
HMGB3P20-201ENST00000417997 BTBD17A6NE02 478 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms