RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CYB5B	O43169	146 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	SSX5	O60225	188 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	CIB2	O75838	187 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	KRAS	P01116	189 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	CD1A	P06126	327 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	UCHL1	P09936	223 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	NUTF2	P61970	127 aa	Known RBP	5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	ZNF818P	Q6ZRF7	136 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	TRIM63	Q969Q1	353 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	TMEM203	Q969S6	136 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	RNF125	Q96EQ8	232 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	UPK3B	Q9BT76	320 aa		5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	MRPS16	Q9Y3D3	137 aa	Known RBP	5.84	□□□□□ -1.47
NIF3L1-206	ENST00000416651	TRAV26-1	A0A087WT03	109 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	IGKV1-17	P01599	117 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MT1HL1	P0DM35	61 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FCGR1A	P12314	374 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MAPK3	P27361	379 aa	Predicted RBP	5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	LPAR6	P43657	344 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	NKX2-1	P43699	371 aa	Predicted RBP	5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	HNRNPA3	P51991	378 aa	Known RBP	5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	OR10A3	P58181	314 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	IZUMO4	Q1ZYL8	232 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FCAMR	Q8WWV6	532 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	LINC00052	Q96N35	136 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	METTL26	Q96S19	204 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SAV1	Q9H4B6	383 aa	Predicted RBP	5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TMEM231	Q9H6L2	316 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RAB22A	Q9UL26	194 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651	GOLT1B	Q9Y3E0	138 aa		5.83	□□□□□ -1.48
NIF3L1-206	ENST00000416651		A0A1W2PS18	150 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	EFCAB10	A6NFE3	127 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MARCH11	A6NNE9	402 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CRX	O43186	299 aa	Predicted RBP	5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SLC22A5	O76082	557 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	OXT	P01178	125 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ATP5G1	P05496	136 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	GNRHR	P30968	328 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FCGR2C	P31995	323 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TALDO1	P37837	337 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ATP5G3	P48201	142 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ALDH3B2	P48448	385 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	WNT4	P56705	351 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FXYD4	P59646	89 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RPS25	P62851	125 aa	Known RBP	5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	OR5I1	Q13606	314 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CDNF	Q49AH0	187 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	DNAL1	Q4LDG9	190 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RNASE12	Q5GAN4	147 aa	Known RBP	5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FAM78B	Q5VT40	261 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	THOC7	Q6I9Y2	204 aa	Known RBP	5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	AMTN	Q6UX39	209 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	NANOGP1	Q8N7R0	232 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	OR13F1	Q8NGS4	319 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TMEM70	Q9BUB7	260 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SLC5A7	Q9GZV3	580 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MAGT1	Q9H0U3	335 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	PLEKHA2	Q9HB19	425 aa		5.82	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TMEM235	A6NFC5	223 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CBY3	A6NI87	242 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	LYRM9	A8MSI8	78 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RORC	P51449	518 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	PSG9	Q00887	426 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ZNF79	Q15937	498 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	AADACL3	Q5VUY0	350 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	C1orf146	Q5VVC0	180 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MZT2B	Q6NZ67	158 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CNIH2	Q6PI25	160 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RXFP4	Q8TDU9	374 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TMEM230	Q96A57	120 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	FAM210A	Q96ND0	272 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	NRN1	Q9NPD7	142 aa		5.81	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SMIM30	A4D0T7	59 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ZNF701	M0R085	212 aa	Predicted RBP	5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651		M0R2Z0	102 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	IGKV1-39	P01597	117 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	IGKV1D-39	P04432	117 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	DTYMK	P23919	212 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	NPBWR1	P48145	328 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SNRPD3	P62318	126 aa	Known RBP	5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CFAP161	Q6P656	301 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	AHSA2	Q719I0	299 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	BAP18	Q8IXM2	172 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CADM3	Q8N126	398 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ZNF114	Q8NC26	417 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	LGALS14	Q8TCE9	139 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	ANXA10	Q9UJ72	324 aa		5.8	□□□□□ -1.48
NIF3L1-206	ENST00000416651	TRAV12-2	A0A075B6T6	113 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	IGLV5-52	A0A0A0MRZ9	124 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	SOCS3	O14543	225 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	MYL12B	O14950	172 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	CLN5	O75503	358 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	PPY	P01298	95 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	RLN1	P04808	185 aa		5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
NIF3L1-206	ENST00000416651	PAX9	P55771	341 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms