RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RAB40CQ96S21 281 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 STRAPQ9Y3F4 350 aaKnown RBP15□□□□□ -0.01
PDLIM2-207ENST00000409417 LSM4Q9Y4Z0 139 aaKnown RBP15□□□□□ -0.01
PDLIM2-207ENST00000409417 IZUMO1RA6ND01 250 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 SCGB1D2O95969 90 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 MBPP02686 304 aaPredicted RBP14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 OR10J1P30954 320 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 OR1S2Q8NGQ3 325 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 ACY3Q96HD9 319 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 C2orf50Q96LR7 162 aa14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 PUS1Q9Y606 427 aaKnown RBP eCLIP14.99□□□□□ -0.01
PDLIM2-207ENST00000409417 ZNF207O43670 478 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 TIGITQ495A1 244 aa14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 BTNL8Q6UX41 500 aa14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 GSG1LQ6UXU4 331 aa14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 GINS3Q9BRX5 216 aa14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 PSENENQ9NZ42 101 aa14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 RCL1Q9Y2P8 373 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-207ENST00000409417 H3BP45 60 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 PTTG1O95997 202 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 PAX9P55771 341 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 TAS2R30P59541 319 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 YPEL3P61236 119 aaPredicted RBP14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 GAMTQ14353 236 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 SLC35E1Q96K37 410 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 ZFAND3Q9H8U3 227 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 SMPXQ9UHP9 88 aa14.97□□□□□ -0.01
PDLIM2-207ENST00000409417 TRAV14DV4A0A0A6YYC5 116 aa14.96□□□□□ -0.01
PDLIM2-207ENST00000409417 PRSS46E5RG02 174 aa14.96□□□□□ -0.01
PDLIM2-207ENST00000409417 TMEM61Q8N0U2 210 aa14.96□□□□□ -0.01
PDLIM2-207ENST00000409417 TRAV25A0A0B4J276 109 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 IGHV7-4-1A0A0J9YVY3 117 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 ZNF785A8K8V0 405 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 IL15RAQ13261 267 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 WDR89Q96FK6 387 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 SELENOKQ9Y6D0 94 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 SMAD5-AS1Q9Y6J3 95 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 C7orf66A4D0T2 115 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 TSC22D2O75157 780 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 Q8WTZ3 238 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 RHPN1-AS1Q9BWJ2 59 aa14.95□□□□□ -0.02
PDLIM2-207ENST00000409417 K7EPK0 472 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 SCAF4O95104 1147 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 RD3LP0DJH9 198 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 GUCA2BQ16661 112 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 TMEM14EPQ6UXP3 125 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 RBPMS2Q6ZRY4 209 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 GTSCR1Q86UQ5 136 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 Q8N1Y9 231 aa14.94□□□□□ -0.02
PDLIM2-207ENST00000409417 ZFP92A6NM28 416 aa14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 GOSR2O14653 212 aa14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 CHEK1O14757 476 aa14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 BMI1P35226 326 aa14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 LAMTOR1Q6IAA8 161 aa14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 LSM5Q9Y4Y9 91 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-207ENST00000409417 IGHV3-49A0A0A0MS15 119 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 SSNA1O43805 119 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 TOMM40O96008 361 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 NPPCP23582 126 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 OR8G2PQ6IF36 304 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 ACOT7LQ6ZUV0 252 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 METTL26Q96S19 204 aa14.92□□□□□ -0.02
PDLIM2-207ENST00000409417 IGKV1D-37A0A075B6S9 117 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 PMS2P5A8MQ11 134 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 L7N2F9 121 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 METTL15P1P0C7V9 234 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 VAMP2P63027 116 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 RNF2Q99496 336 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 TRGV9Q99603 122 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 C11orf1Q9H5F2 150 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 VSIRQ9H7M9 311 aa14.91□□□□□ -0.02
PDLIM2-207ENST00000409417 IGHV3OR16-13A0A075B7E8 117 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 IGHV3-74A0A0B4J1X5 117 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 TSPAN4O14817 238 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 SIX6O95475 246 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 FABP1P07148 127 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 PSG1P11464 419 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 PVALBP20472 110 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 CRYBB3P26998 211 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 S100A10P60903 97 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 RAB32Q13637 225 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 THAP8Q8NA92 274 aa14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 SPAG8Q99932 426 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-207ENST00000409417 IGKV1OR2-108A0A075B7D4 117 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 IL4P05112 153 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 CD5P06127 495 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 CD81P60033 236 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 CYCSP99999 105 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 ZNF90Q03938 601 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 OR10P1Q8NGE3 313 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 OR51G1Q8NGK1 321 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 ST8SIA2Q92186 375 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 B9D2Q9BPU9 175 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 NMES1Q9C002 83 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 A0A1W2PS18 150 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 CCNKO75909 580 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 DLK1P80370 383 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 AKR1C1Q04828 323 aa14.89□□□□□ -0.03
PDLIM2-207ENST00000409417 TMEM144Q7Z5S9 345 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms