RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 BRD3OSQ6XYD6 125 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 OR1L4Q8NGR5 311 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 GGACTQ9BVM4 153 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 NAT8BQ9UHF3 227 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 RPL29P47914 159 aaKnown RBP10.09□□□□□ -0.79
ATG9A-203ENST00000409033 ATP5J2P56134 94 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 PMS2P11Q13670 270 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
ATG9A-203ENST00000409033 VMO1Q7Z5L0 202 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 TMEM167AQ8TBQ9 72 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 SFRP2Q96HF1 295 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 JKAMPQ9P055 326 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 SIGLEC9Q9Y336 463 aa10.09□□□□□ -0.79
ATG9A-203ENST00000409033 NPPCP23582 126 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 MAPK1IP1LQ8NDC0 245 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 NRGNQ92686 78 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 ZNF207O43670 478 aaKnown RBP10.08□□□□□ -0.8
ATG9A-203ENST00000409033 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 IL4P05112 153 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 NTF3P20783 257 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 TMEM30BQ3MIR4 351 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 OR51M1Q9H341 326 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 FCGR2BP31994 310 aaPredicted RBP10.08□□□□□ -0.8
ATG9A-203ENST00000409033 RPL11P62913 178 aaKnown RBP10.08□□□□□ -0.8
ATG9A-203ENST00000409033 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
ATG9A-203ENST00000409033 A0A1B0GUS0 222 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 A0A1B0GW64 132 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 PHOX2AO14813 284 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 CHODLQ9H9P2 273 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 ACANP16112 2415 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 C19orf84I3L1E1 186 aa10.07□□□□□ -0.8
ATG9A-203ENST00000409033 RPL19P84098 196 aaKnown RBP10.07□□□□□ -0.8
ATG9A-203ENST00000409033 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 CR1LQ2VPA4 569 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
ATG9A-203ENST00000409033 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 HIGD1AQ9Y241 93 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 ANKRD17O75179 2603 aaKnown RBP10.06□□□□□ -0.8
ATG9A-203ENST00000409033 NBR2O15453 112 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 IGHV2-70P01814 119 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 HIST1H1BP16401 226 aaKnown RBP10.06□□□□□ -0.8
ATG9A-203ENST00000409033 ZNF137PP52743 207 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 ANAPC16Q96DE5 110 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
ATG9A-203ENST00000409033 PRNTQ86SH4 94 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 NEU4Q8WWR8 484 aaPredicted RBP10.05□□□□□ -0.8
ATG9A-203ENST00000409033 PACRGQ96M98 296 aaPredicted RBP10.05□□□□□ -0.8
ATG9A-203ENST00000409033 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 H0Y8G0 127 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 S100A8P05109 93 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 USF2Q15853 346 aaPredicted RBP10.05□□□□□ -0.8
ATG9A-203ENST00000409033 RPEL1Q2QD12 228 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 IBA57Q5T440 356 aaKnown RBP10.05□□□□□ -0.8
ATG9A-203ENST00000409033 TPTE2P1Q5T6R2 138 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
ATG9A-203ENST00000409033 A0A087WWC5 75 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 TCRBV4S1A1TA0A5B7 111 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 J3KRW8 73 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 SFTPCP11686 197 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 PMCHP20382 165 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 RUSC1-AS1Q66K80 236 aa10.05□□□□□ -0.8
ATG9A-203ENST00000409033 A0A1W2PPR1 153 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 VENTXO95231 258 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 PSG1P11464 419 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 CCL19Q99731 98 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 MUC21A0A140T8X8 626 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
ATG9A-203ENST00000409033 NBEAP1P0C6P0 100 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 S100A12P80511 92 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 PAX5Q02548 391 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 MUC21Q5SSG8 566 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 KAAG1Q9UBP8 84 aa10.04□□□□□ -0.8
ATG9A-203ENST00000409033 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms