RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 MARC2Q969Z3 335 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 TMED9Q9BVK6 235 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 CHST5Q9GZS9 411 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 SLIRPQ9GZT3 109 aaKnown RBP4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 OR51E2Q9H255 320 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 ISG20L2Q9H9L3 353 aaKnown RBP4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 XCL2Q9UBD3 114 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
HMGB3P7-201ENST00000400214 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 LOC107986453A0A1B0GWG9 222 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 DNAJC9-AS1A6NH13 148 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 TMEM212A6NML5 194 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 LINC00587B1AMM8 73 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 J3QLW9 94 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 ORC5O43913 435 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 MOSP00540 346 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 IGLV2-14P01704 120 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 ZNF19P17023 458 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 CXCL3P19876 107 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 MYL9P24844 172 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 S100GP29377 79 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 GNB2P62879 340 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 EMX1Q04741 257 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 CDNFQ49AH0 187 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 TTC32Q5I0X7 151 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 LAMTOR1Q6IAA8 161 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 RPL22L1Q6P5R6 122 aaKnown RBP4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 PLET1Q6UQ28 207 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 C1QL2Q7Z5L3 287 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 EIF4E3Q8N5X7 224 aaKnown RBP4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 STPG4Q8N801 248 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 DEFB108BQ8NET1 73 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 OR8B3Q8NGG8 313 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 OR5AK2Q8NH90 309 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 OR8B2Q96RD0 313 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 CMSS1Q9BQ75 279 aaKnown RBP4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 ABCG5Q9H222 651 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 HES4Q9HCC6 221 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 TMEM138Q9NPI0 162 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 MMP26Q9NRE1 261 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 DOK5Q9P104 306 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 CTSZQ9UBR2 303 aa4.09□□□□□ -1.75
HMGB3P7-201ENST00000400214 IGKV1D-17A0A075B6S4 117 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 A0A0B4J2A0 478 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IGKV1-9A0A0C4DH69 117 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR4C46A6NHA9 309 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 ZNF98A6NK75 572 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 K7N7A8 449 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 PROP1O75360 226 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR7C1O76099 320 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 GYPAP02724 150 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IGLL1P15814 213 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 ATF1P18846 271 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CXCL2P19875 107 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CTRLP40313 264 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR3A4PP47883 348 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CAV3P56539 151 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 LSM3P62310 102 aaKnown RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 HBG1P69891 147 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 HBG2P69892 147 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 SLC35A2P78381 396 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CDK5R1Q15078 307 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 GRK1Q15835 563 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 RUSC1-AS1Q66K80 236 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 HAGHLQ6PII5 290 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CRIP3Q6Q6R5 217 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 ACP7Q6ZNF0 438 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 GDPGP1Q6ZNW5 385 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 Q6ZPA2 131 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 LY6G5BQ8NDX9 201 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR51A4Q8NGJ6 313 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR4P4Q8NGL7 312 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR10J6PQ8NGY7 276 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR10AC1Q8NH08 325 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR9G1Q8NH87 305 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 ADAT3Q96EY9 351 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 RNF185Q96GF1 192 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 METTL26Q96S19 204 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 NRIP2Q9BQI9 281 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 RTBDNQ9BSG5 229 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 MND1Q9BWT6 205 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 WFDC1Q9HC57 220 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IDI2-AS1Q9NZ38 188 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 OR5V1Q9UGF6 321 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 SHPKQ9UHJ6 478 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 ZNF222Q9UK12 451 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 CARHSP1Q9Y2V2 147 aaKnown RBP4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 HSPB11Q9Y547 144 aa4.08□□□□□ -1.76
HMGB3P7-201ENST00000400214 IGHV3OR15-7A0A075B7D8 119 aa4.07□□□□□ -1.76
HMGB3P7-201ENST00000400214 A6NIN4 97 aa4.07□□□□□ -1.76
HMGB3P7-201ENST00000400214 FOXI3A8MTJ6 420 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P7-201ENST00000400214 MYL12BO14950 172 aa4.07□□□□□ -1.76
HMGB3P7-201ENST00000400214 AGPAT2O15120 278 aa4.07□□□□□ -1.76
HMGB3P7-201ENST00000400214 ATG12O94817 140 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms