RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SRIP30626 198 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 YPEL3P61236 119 aaPredicted RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 KHDC3LQ587J8 217 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 Q6Q795 121 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 GNPDA2Q8TDQ7 276 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 PAIP2Q9BPZ3 127 aaKnown RBP0.82□□□□□ -2.28
CD47-203ENST00000398258 TVP23BQ9NYZ1 205 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 TENM1Q9UKZ4 2725 aa0.82□□□□□ -2.28
CD47-203ENST00000398258 HEATR5AQ86XA9 2040 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 LAMB2P55268 1798 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 KIF13BQ9NQT8 1826 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 IGKV1D-42A0A075B6H8 117 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 IGKV3D-7A0A0C4DH55 119 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 IGKV3OR2-268A0A0C4DH90 116 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 HMGB3O15347 200 aaKnown RBP0.81□□□□□ -2.28
CD47-203ENST00000398258 OR2B3O76000 313 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 OR5F1O95221 314 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 NEFHP12036 1026 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 FKBP2P26885 142 aaKnown RBP0.81□□□□□ -2.28
CD47-203ENST00000398258 ARF6P62330 175 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 RHOBP62745 196 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 PDE6HQ13956 83 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 SPANXN5Q5MJ07 72 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.81□□□□□ -2.28
CD47-203ENST00000398258 LCA10Q71F78 164 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 TRAPPC6BQ86SZ2 158 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 LINC00471Q8N535 108 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 PXT1Q8NFP0 134 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 OR4E2Q8NGC2 313 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 OR11H6Q8NGC7 330 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 OR8D4Q8NGM9 314 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 STAG3L4Q8TBR4 150 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 WFDC5Q8TCV5 224 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 ADAT3Q96EY9 351 aaPredicted RBP0.81□□□□□ -2.28
CD47-203ENST00000398258 EPDR1Q9UM22 224 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 UTP11Q9Y3A2 253 aaKnown RBP0.81□□□□□ -2.28
CD47-203ENST00000398258 ARL5AQ9Y689 179 aa0.81□□□□□ -2.28
CD47-203ENST00000398258 KMT2BQ9UMN6 2715 aaPredicted RBP0.8□□□□□ -2.28
CD47-203ENST00000398258 DOCK5Q9H7D0 1870 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 MED1Q15648 1581 aaPredicted RBP0.8□□□□□ -2.28
CD47-203ENST00000398258 MYH11P35749 1972 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 TRAV4A0A0B4J268 109 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 IGKV1-9A0A0C4DH69 117 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 J3QRK9 145 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 CYB5BO43169 146 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 HCRTO43612 131 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 OR4E1P0C645 316 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 ASAH2BP0C7U1 165 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 BAALC-AS2P0C853 105 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 LYNX1P0DP58 116 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 G0S2P27469 103 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 KRTAP10-4P60372 401 aaPredicted RBP0.8□□□□□ -2.28
CD47-203ENST00000398258 RHEBQ15382 184 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 RNASE10Q5GAN6 216 aaKnown RBP0.8□□□□□ -2.28
CD47-203ENST00000398258 DHRS4L2Q6PKH6 230 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 GOLT1AQ6ZVE7 132 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 C15orf53Q8NAA6 179 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 C10orf105Q8TEF2 133 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 FAM172AQ8WUF8 416 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 AQP3Q92482 292 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 AP3S1Q92572 193 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 ARMC1Q9NVT9 282 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 MED29Q9NX70 200 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 TAS2R4Q9NYW5 299 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 MED13Q9UHV7 2174 aa0.8□□□□□ -2.28
CD47-203ENST00000398258 DIDO1Q9BTC0 2240 aaKnown RBP0.8□□□□□ -2.28
CD47-203ENST00000398258 TOP2BQ02880 1626 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 TRAV14DV4A0A0A6YYC5 116 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 TRAV3A0A0B4J244 114 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 TRAV1-1A0A0B4J248 108 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 C2orf70A6NJV1 201 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 SULT1B1O43704 296 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 CST8O60676 142 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 MGST1P10620 155 aaKnown RBP0.79□□□□□ -2.28
CD47-203ENST00000398258 ATP5G3P48201 142 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 PIGPP57054 158 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 HSPE1P61604 102 aaKnown RBP0.79□□□□□ -2.28
CD47-203ENST00000398258 GNG5P63218 68 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 CDK5R1Q15078 307 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 LYRM7Q5U5X0 104 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 PHF13Q86YI8 300 aaPredicted RBP0.79□□□□□ -2.28
CD47-203ENST00000398258 EXOC3-AS1Q8N2X6 119 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 C12orf29Q8N999 325 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 OR13D1Q8NGV5 346 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 GPR146Q96CH1 333 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 HIST1H2BLQ99880 126 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 SLC50A1Q9BRV3 221 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 GID8Q9NWU2 228 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 NHP2Q9NX24 153 aaKnown RBP0.79□□□□□ -2.28
CD47-203ENST00000398258 OR5AC2Q9NZP5 309 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 SS18L2Q9UHA2 77 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 STOML2Q9UJZ1 356 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 HS3ST2Q9Y278 367 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 IQSEC2Q5JU85 1478 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 ARHGEF11O15085 1522 aa0.79□□□□□ -2.28
CD47-203ENST00000398258 BAZ1AQ9NRL2 1556 aaPredicted RBP0.79□□□□□ -2.28
CD47-203ENST00000398258 CAMSAP1Q5T5Y3 1602 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 IGKV3-7A0A075B6H7 116 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 TRBV19A0A075B6N1 114 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms