RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CCL24O00175 119 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 NUPL2O15504 423 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 SCGB2A1O75556 95 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 C1QBP02746 253 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 CTSGP08311 255 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 ZNF616Q08AN1 781 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 CLINT1Q14677 625 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 SPSB3Q6PJ21 355 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 CHRDL1Q9BU40 450 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 TMEM147Q9BVK8 224 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 SMIM3Q9BZL3 60 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 UQCC1Q9NVA1 299 aa18.16■□□□□ 0.5
TSPAN4-203ENST00000397397 TRAV30A0A087WSZ9 112 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 RNF222A6NCQ9 220 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 HMSDA8MTL9 139 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 GGCTO75223 188 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 OR10J1P30954 320 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 AP2S1P53680 142 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 TMEM144Q7Z5S9 345 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 OR4F17Q8NGA8 305 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 OR4F4Q96R69 305 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 NPVFQ9HCQ7 196 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 ZFP92A6NM28 416 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 PFDN1O60925 122 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 OR2C1O95371 312 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 IGLC1P0CG04 106 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 ADMP35318 185 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 MYCNOSP40205 109 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 RPEL1Q2QD12 228 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 TIGITQ495A1 244 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 MFFQ9GZY8 342 aa18.15■□□□□ 0.5
TSPAN4-203ENST00000397397 ZP3P21754 424 aa18.14■□□□□ 0.49
TSPAN4-203ENST00000397397 VWC2Q2TAL6 325 aa18.14■□□□□ 0.49
TSPAN4-203ENST00000397397 THAP8Q8NA92 274 aa18.14■□□□□ 0.49
TSPAN4-203ENST00000397397 IGHV3-35A0A0C4DH35 117 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 UBE2L5PA0A1B0GUS4 154 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 M0QZ24 198 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 HOXD3P31249 432 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 SLURP1P55000 103 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 TREML4Q6UXN2 200 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 ATP5SQ99766 215 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 FBXL17Q9UF56 701 aa18.13■□□□□ 0.49
TSPAN4-203ENST00000397397 IGKV1D-37A0A075B6S9 117 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 IGKV1OR2-108A0A075B7D4 117 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 IGKV1-17P01599 117 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 PF4P02776 101 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 RELQ04864 619 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 FHL3Q13643 280 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 ZFP69Q49AA0 526 aa18.12■□□□□ 0.49
TSPAN4-203ENST00000397397 DFFBO76075 338 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 EIF2B2P49770 351 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 OR2F1Q13607 317 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 TEPPQ6URK8 271 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 HYLS1Q96M11 299 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 TRGV9Q99603 122 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 WFDC1Q9HC57 220 aa18.11■□□□□ 0.49
TSPAN4-203ENST00000397397 TSPAN15O95858 294 aa18.1■□□□□ 0.49
TSPAN4-203ENST00000397397 ZNF600Q6ZNG1 722 aa18.1■□□□□ 0.49
TSPAN4-203ENST00000397397 WDR83OSQ9Y284 106 aa18.1■□□□□ 0.49
TSPAN4-203ENST00000397397 CXCL2P19875 107 aa18.09■□□□□ 0.49
TSPAN4-203ENST00000397397 YPEL3P61236 119 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-203ENST00000397397 ZNF90Q03938 601 aa18.09■□□□□ 0.49
TSPAN4-203ENST00000397397 GPHB5Q86YW7 130 aa18.09■□□□□ 0.49
TSPAN4-203ENST00000397397 LSM4Q9Y4Z0 139 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-203ENST00000397397 IFNA5P01569 189 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 FABP1P07148 127 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 FGF7P21781 194 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 ZNF345Q14585 488 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 FAM106AQ4KMX7 169 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 BTNL8Q6UX41 500 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 KCNRGQ8N5I3 272 aa18.08■□□□□ 0.49
TSPAN4-203ENST00000397397 A0A0D9SG52 128 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 NDUFA4O00483 81 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 YIF1AO95070 293 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 TOMM40O96008 361 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 RD3LP0DJH9 198 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 SYNJ2BPP57105 145 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 RAB31Q13636 194 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 KLF5Q13887 457 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 CYP2G1PQ6ZSU1 146 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 C1QL4Q86Z23 238 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 Q8WTZ3 238 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 DLX4Q92988 240 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 ZNF414Q96IQ9 312 aa18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 PUS1Q9Y606 427 aaKnown RBP eCLIP18.07■□□□□ 0.48
TSPAN4-203ENST00000397397 ZNF320A2RRD8 509 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 MGST2Q99735 147 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 AGPAT2O15120 278 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 PSG1P11464 419 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 CAMLGP49069 296 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 ZNF266Q14584 549 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 TOMM20LQ6UXN7 152 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 UNQ9165/PRO28630Q6UXU0 137 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 SCGB1C1Q8TD33 95 aa18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 WDR61Q9GZS3 305 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-203ENST00000397397 IGHV3OR16-8A0A075B7F1 116 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 TAAR5O14804 337 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 MPDU1O75352 247 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 LGALSLQ3ZCW2 172 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 TMUB2Q71RG4 321 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms