RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 STPG3Q8N7X2 389 aa12.1□□□□□ -0.47
CLTA-203ENST00000396603 ZNF431Q8TF32 576 aaPredicted RBP12.1□□□□□ -0.47
CLTA-203ENST00000396603 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
CLTA-203ENST00000396603 A0A0J9YWU9 116 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 IL5P05113 134 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
CLTA-203ENST00000396603 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
CLTA-203ENST00000396603 NRARPQ7Z6K4 114 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 RNF183Q96D59 192 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 MISP3Q96FF7 219 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
CLTA-203ENST00000396603 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
CLTA-203ENST00000396603 OR2T8A6NH00 312 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
CLTA-203ENST00000396603 RPP30P78346 268 aaKnown RBP12.08□□□□□ -0.48
CLTA-203ENST00000396603 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 SLC24A4Q8NFF2 622 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 DTD1Q8TEA8 209 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 U3KQ87 197 aa12.08□□□□□ -0.48
CLTA-203ENST00000396603 RPS10-NUDT3A0A1W2PQS6 291 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 INMT-MINDY4F8WBC2 141 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 PITX3O75364 302 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 PTTG1O95997 202 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
CLTA-203ENST00000396603 DEFB135Q30KP9 77 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 C12orf45Q8N5I9 185 aaPredicted RBP12.07□□□□□ -0.48
CLTA-203ENST00000396603 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
CLTA-203ENST00000396603 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 TXN2Q99757 166 aa12.07□□□□□ -0.48
CLTA-203ENST00000396603 IGHV3-35A0A0C4DH35 117 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 F8W735 103 aaPredicted RBP12.06□□□□□ -0.48
CLTA-203ENST00000396603 K7EIM0 57 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 WRBO00258 174 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 ADAP1O75689 374 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 LY6G6CO95867 125 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 IFNA10P01566 189 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 CD5P06127 495 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 RNASE2P10153 161 aaKnown RBP12.06□□□□□ -0.48
CLTA-203ENST00000396603 MFAP2P55001 183 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 MFAP4P55083 255 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 ETFRF1Q6IPR1 90 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
CLTA-203ENST00000396603 SEC22CQ9BRL7 303 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 MARVELD1Q9BSK0 173 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 RBKSQ9H477 322 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 SELENOKQ9Y6D0 94 aa12.06□□□□□ -0.48
CLTA-203ENST00000396603 NXPH3O95157 252 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 MT-CO2P00403 227 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 NPY1RP25929 384 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 NPBWR1P48145 328 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 PMS2P11Q13670 270 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
CLTA-203ENST00000396603 Q56UQ5 140 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 GATAD1Q8WUU5 269 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 OR10C1Q96KK4 312 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 MAP6D1Q9H9H5 199 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 UBQLN2Q9UHD9 624 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 SMPXQ9UHP9 88 aa12.05□□□□□ -0.48
CLTA-203ENST00000396603 I3L2K1 104 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
CLTA-203ENST00000396603 SYNGR2O43760 224 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 CTSGP08311 255 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 ADMP35318 185 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 OPRK1P41145 380 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
CLTA-203ENST00000396603 RAB11AP62491 216 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 UBAC2Q8NBM4 344 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 C20orf24Q9BUV8 137 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
CLTA-203ENST00000396603 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
CLTA-203ENST00000396603 C5orf51A6NDU8 294 aa12.03□□□□□ -0.48
CLTA-203ENST00000396603 SLC25A4P12235 298 aa12.03□□□□□ -0.48
CLTA-203ENST00000396603 EWSR1Q01844 656 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLTA-203ENST00000396603 FRAS1Q86XX4 4008 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 FAM25EA8MYX2 175 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 GNG7O60262 68 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 IFNA4P05014 189 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 GSG1LQ6UXU4 331 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 ZBTB8BQ8NAP8 495 aaPredicted RBP12.02□□□□□ -0.49
CLTA-203ENST00000396603 OR4D5Q8NGN0 318 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 MFFQ9GZY8 342 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 CSTL1Q9H114 145 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.49
CLTA-203ENST00000396603 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
CLTA-203ENST00000396603 IGHV3-21A0A0B4J1V1 117 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 MPTX1A8MV57 137 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 CHEK1O14757 476 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 TCTAP57738 103 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 ID3Q02535 119 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 RNF2Q99496 336 aa12.01□□□□□ -0.49
CLTA-203ENST00000396603 RHPN1-AS1Q9BWJ2 59 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms