RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRAV38-1A0A0B4J264 116 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 SLC22A1O15245 554 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF324O75467 553 aaPredicted RBP3.39□□□□□ -1.87
GABPB1-204ENST00000396464 LYZL6O75951 148 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 DPM2O94777 84 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 NRASP01111 189 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 IGKV1-5P01602 117 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 IFNA4P05014 189 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 UCHL1P09936 223 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 CGB3P0DN86 165 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 CGB7P0DN87 165 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 AZU1P20160 251 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 SYCNQ0VAF6 134 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 SP6Q3SY56 376 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
GABPB1-204ENST00000396464 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
GABPB1-204ENST00000396464 TMEM244Q5VVB8 128 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 Q8N976 141 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 OR11G2Q8NGC1 345 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 OR52R1Q8NGF1 315 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 TUBA4BQ9H853 241 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 C21orf62Q9NYP8 219 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 CKLFQ9UBR5 152 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 PLXNB3Q9ULL4 1909 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 COL18A1P39060 1754 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 TNS2Q63HR2 1409 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 TLCD2A6NGC4 264 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 M0R378 163 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 PRM2P04554 102 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 LINC00694P0DN24 101 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 GNG2P59768 71 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 CCL20P78556 96 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 LGALS9BQ3B8N2 356 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 C1orf140Q5VVS0 124 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 LGALS9CQ6DKI2 356 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 SSX8Q7RTT4 187 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF695Q8IW36 515 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 RPP25LQ8N5L8 163 aaKnown RBP3.38□□□□□ -1.87
GABPB1-204ENST00000396464 PPP3R2Q96LZ3 170 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 PDCD10Q9BUL8 212 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 C1QTNF6Q9BXI9 259 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 MRPL16Q9NX20 251 aaKnown RBP3.38□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF586Q9NXT0 402 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 PHLDA3Q9Y5J5 127 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 MEGF6O75095 1541 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 ATG2BQ96BY7 2078 aa3.38□□□□□ -1.87
GABPB1-204ENST00000396464 SCN11AQ9UI33 1791 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 SLIT2O94813 1529 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 IGHV3-64DA0A0J9YX35 117 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 ZNF860A6NHJ4 632 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 J3QR89 54 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 OR2T1O43869 369 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 OR5AC1P0C628 307 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 P0DMU3 169 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 FAM231AP0DMU4 169 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 FAM231CP0DMU5 169 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 CRYBB3P26998 211 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 VEGFCP49767 419 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
GABPB1-204ENST00000396464 OR8G1Q15617 311 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 KRTAP24-1Q3LI83 254 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 RPL22L1Q6P5R6 122 aaKnown RBP3.37□□□□□ -1.87
GABPB1-204ENST00000396464 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 STAG3L4Q8TBR4 150 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 AP1S3Q96PC3 154 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 VGLL1Q99990 258 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 DERL1Q9BUN8 251 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 FAM60AQ9NP50 221 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 RNF11Q9Y3C5 154 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 SHANK3Q9BYB0 1731 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 DSCAML1Q8TD84 2053 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 BRWD3Q6RI45 1802 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 LAMB4A4D0S4 1761 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 TICRRQ7Z2Z1 1910 aa3.37□□□□□ -1.87
GABPB1-204ENST00000396464 NHSQ6T4R5 1651 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 A0A1B0GW54 56 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 C20orf202A1L168 122 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 C1orf196B1AJZ1 125 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 LY6LH3BQJ8 138 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 BUB1B-PAK6H3BSN5 160 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 CORTO00230 105 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 HLA-DQA1P01909 254 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 IGLC6P0CF74 106 aa3.36□□□□□ -1.87
GABPB1-204ENST00000396464 CSRP1P21291 193 aaKnown RBP3.36□□□□□ -1.87
GABPB1-204ENST00000396464 RPL35P42766 123 aaKnown RBP3.36□□□□□ -1.87
GABPB1-204ENST00000396464 COPZ1P61923 177 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms