RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TMEM170AQ8WVE7 144 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
UPK3A-202ENST00000396082 CITED4Q96RK1 184 aa13.05□□□□□ -0.32
UPK3A-202ENST00000396082 A0A1W2PS18 150 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 C3orf84H3BNL1 204 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 MED6O75586 246 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 IGKV1-17P01599 117 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 IAPPP10997 89 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 SLC25A6P12236 298 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 GBGT1Q8N5D6 347 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 FAM110AQ9BQ89 295 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
UPK3A-202ENST00000396082 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
UPK3A-202ENST00000396082 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 FAM90A26D6RGX4 464 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 PITX3O75364 302 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
UPK3A-202ENST00000396082 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 ATP5IP56385 69 aaPredicted RBP13.03□□□□□ -0.32
UPK3A-202ENST00000396082 ODF3L2Q3SX64 289 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 GGNBP1Q5YKI7 109 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 Q8WTZ3 238 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 NPIPB3Q92617 1050 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 VSIRQ9H7M9 311 aa13.03□□□□□ -0.32
UPK3A-202ENST00000396082 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.33
UPK3A-202ENST00000396082 DFFBO76075 338 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
UPK3A-202ENST00000396082 RAB11AP62491 216 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 C4orf46Q504U0 113 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
UPK3A-202ENST00000396082 CIB3Q96Q77 187 aaPredicted RBP13.02□□□□□ -0.33
UPK3A-202ENST00000396082 STAB2Q8WWQ8 2551 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 IFNA21P01568 189 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 OR4E1P0C645 316 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 ANXA7P20073 488 aaKnown RBP13.01□□□□□ -0.33
UPK3A-202ENST00000396082 BTCP35070 178 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 APOC4P55056 127 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
UPK3A-202ENST00000396082 DHRS2Q13268 280 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 FAM90A2PQ658T7 463 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
UPK3A-202ENST00000396082 LYRM1O43325 122 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 SYNGR2O43760 224 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 ADAP1O75689 374 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 IL4P05112 153 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 LYL1P12980 280 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 CRYBB3P26998 211 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 P2RY1P47900 373 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 RPP30P78346 268 aaKnown RBP13□□□□□ -0.33
UPK3A-202ENST00000396082 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 MS4A6AQ9H2W1 248 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 EDA2RQ9HAV5 297 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 RABAC1Q9UI14 185 aa13□□□□□ -0.33
UPK3A-202ENST00000396082 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 WRBO00258 174 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 TOMM40O96008 361 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
UPK3A-202ENST00000396082 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
UPK3A-202ENST00000396082 GPX4P36969 197 aaPredicted RBP12.99□□□□□ -0.33
UPK3A-202ENST00000396082 EIF2B2P49770 351 aaKnown RBP12.99□□□□□ -0.33
UPK3A-202ENST00000396082 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 STXBP6Q8NFX7 210 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
UPK3A-202ENST00000396082 CCDC32Q9BV29 185 aa12.98□□□□□ -0.33
UPK3A-202ENST00000396082 MAP6D1Q9H9H5 199 aa12.98□□□□□ -0.33
UPK3A-202ENST00000396082 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 PLA2G10O15496 165 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 FABP1P07148 127 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 GAMTQ14353 236 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 CASC10Q5T4H9 136 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
UPK3A-202ENST00000396082 TRAV2A0A0B4J234 112 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 HELTA6NFD8 242 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 H3BP45 60 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 PSG1P11464 419 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 NKX2-1P43699 371 aaPredicted RBP12.96□□□□□ -0.33
UPK3A-202ENST00000396082 USF2Q15853 346 aaPredicted RBP12.96□□□□□ -0.33
UPK3A-202ENST00000396082 ZNF124Q15973 351 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 ZFAND6Q6FIF0 208 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 S100ZQ8WXG8 99 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
UPK3A-202ENST00000396082 TRAV6A0A075B6T7 132 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 KIR2DL5BA0A0G2JN68 375 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 KIR2DL5BA0A0G2JPC4 375 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 UBE2CO00762 179 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 DEFB131AP59861 70 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
UPK3A-202ENST00000396082 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms