RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 RNASE2P10153 161 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 ZNF134P52741 427 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 SLC25A48Q6ZT89 311 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 ZNF596Q8TC21 504 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 MBD3L4A6NDZ8 208 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 MBD3L3A6NE82 208 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 MBD3L5A6NJ08 208 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 CYB5R2Q6BCY4 276 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 BPIFA4PQ86YQ2 179 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 RPP21Q9H633 154 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-209ENST00000394804 GPX1P07203 203 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 GPR6P46095 362 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 GNG5P63218 68 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 THYN1Q9P016 225 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 LOXL3P58215 753 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 SRSF6Q13247 344 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 MLANAQ16655 118 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 UNQ6494/PRO21346Q6UXR6 183 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 ZNF788Q6ZQV5 615 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 OR8B3Q8NGG8 313 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 LAMTOR2Q9Y2Q5 125 aa9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 SOX21Q9Y651 276 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-209ENST00000394804 TDGF1P3P51864 188 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 C17orf58Q2M2W7 97 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 Q6ZWC4 215 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 NEU1Q99519 415 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 V9GYV3 84 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 TSKUQ8WUA8 353 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 VPS25Q9BRG1 176 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 PRR20EP86478 221 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 PRR20CP86479 221 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 PRR20DP86480 221 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 PRR20BP86481 221 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 PRR20AP86496 221 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 FAM57AQ8TBR7 257 aa9.53□□□□□ -0.88
UBE2D3-209ENST00000394804 ASPMQ8IZT6 3477 aa9.52□□□□□ -0.88
UBE2D3-209ENST00000394804 ZNF474Q6S9Z5 364 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 A6NNC1 897 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 H0YJW9 148 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 CDKN1AP38936 164 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 PRSS8Q16651 343 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 SLC25A34Q6PIV7 304 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 SNRNP40Q96DI7 357 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 CLEC7AQ9BXN2 247 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 WDFY3Q8IZQ1 3526 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 FAM90A27PA6NNH2 459 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 LIPFP07098 398 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 Q9H3A6 140 aa9.52□□□□□ -0.89
UBE2D3-209ENST00000394804 TMSB15BA0A087X1C1 80 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 GGTLC3B5MD39 225 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 DLEU1O43261 78 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 PLA2G5P39877 138 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 POU2AF1Q16633 256 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 HIF1ANQ9NWT6 349 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 WNK2Q9Y3S1 2297 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 TRBV20OR9-2A0A075B6H5 130 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1W2PRD5 423 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1W2PRF3 423 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 A0A1W2PRM7 423 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 OR4C46A6NHA9 309 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 CBY3A6NI87 242 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 K7EN84 100 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 GATA4P43694 442 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 RALYQ9UKM9 306 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 TNCP24821 2201 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 TFPI2P48307 235 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 C12orf54Q6X4T0 127 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-209ENST00000394804 ZNRD1Q9P1U0 126 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms