RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 LAMA5O15230 3695 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 LOC389332A0A1B0GUA5 103 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 BRI3O95415 125 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 Q6ZSR3 168 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 FAM110AQ9BQ89 295 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 FAM173AQ9BQD7 235 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 FSCN3Q9NQT6 498 aa12.32□□□□□ -0.44
VLDLR-202ENST00000382099 EP300Q09472 2414 aaPredicted RBP12.31□□□□□ -0.44
VLDLR-202ENST00000382099 ABHD17AQ96GS6 310 aa12.31□□□□□ -0.44
VLDLR-202ENST00000382099 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
VLDLR-202ENST00000382099 FAM27BQ5VT28 67 aa12.31□□□□□ -0.44
VLDLR-202ENST00000382099 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
VLDLR-202ENST00000382099 ZNF318Q5VUA4 2279 aa12.31□□□□□ -0.44
VLDLR-202ENST00000382099 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 IGHV3-9P01782 118 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 GCSAMQ8N6F7 178 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 MBD6Q96DN6 1003 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 AMMECR1Q9Y4X0 333 aaPredicted RBP12.3□□□□□ -0.44
VLDLR-202ENST00000382099 DEFB108AA8MXU0 73 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 XGP55808 180 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 UBE2L3P68036 154 aaKnown RBP12.3□□□□□ -0.44
VLDLR-202ENST00000382099 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 CFAP47Q6ZTR5 3102 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 SVILO95425 2214 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.3□□□□□ -0.44
VLDLR-202ENST00000382099 J3KRW8 73 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
VLDLR-202ENST00000382099 OR1C1Q15619 314 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 TTC9CQ8N5M4 171 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
VLDLR-202ENST00000382099 COLCA1Q6ZS62 124 aa12.29□□□□□ -0.44
VLDLR-202ENST00000382099 TANC2Q9HCD6 1990 aa12.29□□□□□ -0.44
VLDLR-202ENST00000382099 Q6ZUT4 128 aa12.29□□□□□ -0.44
VLDLR-202ENST00000382099 DCHS1Q96JQ0 3298 aa12.29□□□□□ -0.44
VLDLR-202ENST00000382099 IGKV3D-11A0A0A0MRZ8 115 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 KIR2DS5A0A0G2JLQ3 304 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 A0A0G2JNG1 304 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 KIR2DS3K7RE56 304 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 FCGR3BO75015 233 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 KIR2DS5Q14953 304 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 TEX29Q8N6K0 151 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 FGF23Q9GZV9 251 aaPredicted RBP12.28□□□□□ -0.44
VLDLR-202ENST00000382099 TRBV20-1A0A075B6N2 111 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 ACP1P24666 158 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 DPF1Q92782 380 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
VLDLR-202ENST00000382099 HARBI1Q96MB7 349 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 GNG5P63218 68 aa12.28□□□□□ -0.44
VLDLR-202ENST00000382099 SRSF6Q13247 344 aaKnown RBP12.28□□□□□ -0.44
VLDLR-202ENST00000382099 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.44
VLDLR-202ENST00000382099 TRAV5A0A0B4J249 113 aa12.27□□□□□ -0.44
VLDLR-202ENST00000382099 MGST3O14880 152 aa12.27□□□□□ -0.44
VLDLR-202ENST00000382099 ZFAND6Q6FIF0 208 aa12.27□□□□□ -0.44
VLDLR-202ENST00000382099 PRELID3AQ96N28 172 aa12.27□□□□□ -0.44
VLDLR-202ENST00000382099 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
VLDLR-202ENST00000382099 IGHV4-34P06331 123 aa12.27□□□□□ -0.45
VLDLR-202ENST00000382099 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.45
VLDLR-202ENST00000382099 RFESDQ8TAC1 157 aa12.27□□□□□ -0.45
VLDLR-202ENST00000382099 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.45
VLDLR-202ENST00000382099 CNOT1A5YKK6 2376 aaKnown RBP12.27□□□□□ -0.45
VLDLR-202ENST00000382099 LTAP01374 205 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 CR1LQ2VPA4 569 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 YRDCQ86U90 279 aaKnown RBP12.26□□□□□ -0.45
VLDLR-202ENST00000382099 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 TAAR6Q96RI8 345 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 CDIP1Q9H305 208 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 KMT2EQ8IZD2 1858 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 YPEL5P62699 121 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 CDX2Q99626 313 aaPredicted RBP12.26□□□□□ -0.45
VLDLR-202ENST00000382099 ENY2Q9NPA8 101 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
VLDLR-202ENST00000382099 IGLL5B9A064 214 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 FOXI1Q12951 378 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
VLDLR-202ENST00000382099 ZNF441Q8N8Z8 693 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 OR2H1Q9GZK4 316 aa12.26□□□□□ -0.45
VLDLR-202ENST00000382099 P01737 135 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 MOB3BQ86TA1 216 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 ZNF414Q96IQ9 312 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
VLDLR-202ENST00000382099 LINC00473A8K010 186 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms