RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 C1orf194Q5T5A4 169 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 GAFA1Q96PS6 74 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 DNAJC13O75165 2243 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV1-69DA0A0B4J2H0 117 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 FGF16O43320 207 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV1-69P01742 117 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3-23P01764 117 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 B3GALT5-AS1P59052 145 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 C1orf122Q6ZSJ8 110 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 KLHL30-AS1Q8NEE0 82 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 LYZL4Q96KX0 146 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 LAMTOR2Q9Y2Q5 125 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 CARHSP1Q9Y2V2 147 aaKnown RBP5.9□□□□□ -1.46
CCDC171-201ENST00000380701 COL4A1P02462 1669 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3-49A0A0A0MS15 119 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 IGKV1-9A0A0C4DH69 117 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 C1QL1O75973 258 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 ELANEP08246 267 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 SLAQ13239 276 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 DEFB121Q5J5C9 76 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 RCHY1Q96PM5 261 aa5.9□□□□□ -1.46
CCDC171-201ENST00000380701 TCF21O43680 179 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 NAPSAO96009 420 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 EMP1P54849 157 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 H2BFSP57053 126 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 Q0VFX4 171 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 MBD3L1Q8WWY6 194 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 SVILO95425 2214 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 TRAV9-2A0A087WT02 112 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 DPRXA6NFQ7 191 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 TOMM40O96008 361 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 APOHP02749 345 aaPredicted RBP5.9□□□□□ -1.47
CCDC171-201ENST00000380701 OTX1P32242 354 aaPredicted RBP5.9□□□□□ -1.47
CCDC171-201ENST00000380701 ZNF562Q6V9R5 426 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 RASL10AQ92737 203 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 PLEKHB2Q96CS7 222 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 H3BTX0 84 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 PSCAO43653 123 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 EGR1P18146 543 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 PRO1933Q9H354 126 aa5.9□□□□□ -1.47
CCDC171-201ENST00000380701 H0YJW9 148 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 HBDP02042 147 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 IL17RELQ6ZVW7 336 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 LINC00311Q8N616 119 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 PARD6GQ9BYG4 376 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SEPSECSQ9HD40 501 aaKnown RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 TUBGCP6Q96RT7 1819 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 LINC01619G3V211 115 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 C1QCP02747 245 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 ZNF25P17030 456 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 IFITM2Q01629 132 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 TFF3Q07654 80 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SPOCK3Q9BQ16 436 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 TOMM7Q9P0U1 55 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SCN3AQ9NY46 2000 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 TRAV1-1A0A0B4J248 108 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 ZNF474Q6S9Z5 364 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 PHLDA1Q8WV24 401 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SIGLEC9Q9Y336 463 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 IGHV3-66A0A0C4DH42 116 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 IGHV2-70DA0A0C4DH43 119 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SRP19P09132 144 aaKnown RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 NMSQ5H8A3 153 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 BPESC1Q9GZL8 116 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 ASCL4Q6XD76 172 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 OR5A1Q8NGJ0 315 aa5.89□□□□□ -1.47
CCDC171-201ENST00000380701 SLC25A39Q9BZJ4 359 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-201ENST00000380701 CD28P10747 220 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 MST1P26927 711 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 YPEL3P61236 119 aaPredicted RBP5.88□□□□□ -1.47
CCDC171-201ENST00000380701 PUSL1Q8N0Z8 303 aaKnown RBP5.88□□□□□ -1.47
CCDC171-201ENST00000380701 EP300Q09472 2414 aaPredicted RBP5.88□□□□□ -1.47
CCDC171-201ENST00000380701 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 CFHR2P36980 270 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 CKS1BP61024 79 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM160Q9NX00 188 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 PCM1Q15154 2024 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 VCYO14598 125 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 SNRPCP09234 159 aaKnown RBP5.88□□□□□ -1.47
CCDC171-201ENST00000380701 E7EQL1 145 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 F8WEM9 126 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 EFNA2O43921 213 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 LCNL1Q6ZST4 164 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 FOXC2Q99958 501 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 DPH3P1Q9H4G8 78 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 H7C2G1 150 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 J3QRE1 110 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 IGHV3-48P01763 117 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 ICE1Q9Y2F5 2266 aa5.88□□□□□ -1.47
CCDC171-201ENST00000380701 DPM2O94777 84 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 SAA4P35542 130 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM158Q8WZ71 300 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms