RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TMEM8BA6NDV4 472 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 FOXI3A8MTJ6 420 aaPredicted RBP11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 CCKARP32238 428 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 C11orf53Q8IXP5 236 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 TUBA4BQ9H853 241 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 WNT2P09544 360 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 HIST1H1EP10412 219 aaKnown RBP11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 Q8TCH9 128 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 C21orf62Q9NYP8 219 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 FAM90A9PA6NNJ1 464 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 CD69Q07108 199 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 METTL26Q96S19 204 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
SHROOM1-203ENST00000378679 ZNF137PP52743 207 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM183AQ8IXX5 376 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 OR2D3Q8NGH3 330 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 ABCA2Q9BZC7 2435 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 MFAP2P55001 183 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 DLX1P56177 255 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 RELBQ01201 579 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 PRR31Q5SQ13 230 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 MIR17HGQ75NE6 70 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 HIST3H2BBQ8N257 126 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 NHLRC2Q8NBF2 726 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 TRAV40A0A0B4J280 105 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 FBLL1A6NHQ2 334 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 TRGV3P03979 118 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 RPL7P18124 248 aaKnown RBP11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 FCER1GP30273 86 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 ICAM4Q14773 271 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
SHROOM1-203ENST00000378679 H0YJW9 148 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 SCGB2A2Q13296 93 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 PRSS8Q16651 343 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 WDR73Q6P4I2 378 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 COL6A3P12111 3177 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 CHD3Q12873 2000 aaKnown RBP11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 GPR183P32249 361 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 ATP5G3P48201 142 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 AARDQ4LEZ3 155 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 Q8NA96 180 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 CLDND2Q8NHS1 167 aa11.6□□□□□ -0.55
SHROOM1-203ENST00000378679 CGB1A6NKQ9 187 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 MMP23AO75900 390 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 UQCRFS1P47985 274 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM50AO95807 157 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM155Q4W5P6 130 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 VMO1Q7Z5L0 202 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 SLC17A3O00476 420 aa11.59□□□□□ -0.55
SHROOM1-203ENST00000378679 EFNB3Q15768 340 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 SPRNQ5BIV9 151 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 COL5A1-AS1Q5SY13 56 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 FAM162BQ5T6X4 162 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM167AQ8TBQ9 72 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 NDUFAF3Q9BU61 184 aa11.58□□□□□ -0.55
SHROOM1-203ENST00000378679 LRP4O75096 1905 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 BUB1B-PAK6H3BSN5 160 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 GCGP01275 180 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 MAS1LP35410 378 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 C17orf58Q2M2W7 97 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 TNCP24821 2201 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 A0A1B0GUS0 222 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 C15orf65H3BRN8 121 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 EREGO14944 169 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 IGKV1-39P01597 117 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 AMBPP02760 352 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 IGKV1D-39P04432 117 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 NPPCP23582 126 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 GBGT1Q8N5D6 347 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 ST6GALNAC6Q969X2 333 aa11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 USP9XQ93008 2570 aaPredicted RBP11.58□□□□□ -0.56
SHROOM1-203ENST00000378679 M0R2Z0 102 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 ITGB1BP1O14713 200 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 IGHV2-70P01814 119 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms