RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 LHFPL4Q7Z7J7 247 aa13.36□□□□□ -0.27
TRIM39-201ENST00000376656 CST9LQ9H4G1 147 aa13.36□□□□□ -0.27
TRIM39-201ENST00000376656 GSX1Q9H4S2 264 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-201ENST00000376656 LEPROTL1O95214 131 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 SLC25A34Q6PIV7 304 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 DLL1O00548 723 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 PPBPP02775 128 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
TRIM39-201ENST00000376656 FSTL3O95633 263 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 GUSBP1Q15486 140 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 GTSF1Q8WW33 167 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-201ENST00000376656 NAV3Q8IVL0 2385 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 CFHR2P36980 270 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 ZNF137PP52743 207 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
TRIM39-201ENST00000376656 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 SLC25A5P05141 298 aaKnown RBP13.34□□□□□ -0.27
TRIM39-201ENST00000376656 MYCNOSP40205 109 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 OCIAD2Q56VL3 154 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 C16orf54Q6UWD8 224 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 C9orf106Q8NAJ2 232 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 VPS25Q9BRG1 176 aa13.34□□□□□ -0.27
TRIM39-201ENST00000376656 ICE1Q9Y2F5 2266 aa13.33□□□□□ -0.27
TRIM39-201ENST00000376656 SPRY3O43610 288 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 ZNF138P52744 262 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
TRIM39-201ENST00000376656 MRPL36Q9P0J6 103 aaKnown RBP13.33□□□□□ -0.28
TRIM39-201ENST00000376656 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 H0Y8G0 127 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 MOSP00540 346 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 LHBP01229 141 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 DEFB108BQ8NET1 73 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 ITLN1Q8WWA0 313 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.28
TRIM39-201ENST00000376656 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 TMEM11P17152 192 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 SCRT2Q9NQ03 307 aa13.33□□□□□ -0.28
TRIM39-201ENST00000376656 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
TRIM39-201ENST00000376656 SPENQ96T58 3664 aaKnown RBP13.32□□□□□ -0.28
TRIM39-201ENST00000376656 FAM162BQ5T6X4 162 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 HES3Q5TGS1 186 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 LINC00305Q7Z4B0 112 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 PMCHL2Q9BQD1 86 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-201ENST00000376656 A0A087X0K7 114 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 PGPA6NDG6 321 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
TRIM39-201ENST00000376656 C1orf162Q8NEQ5 155 aaPredicted RBP13.32□□□□□ -0.28
TRIM39-201ENST00000376656 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 ZNF835Q9Y2P0 537 aa13.32□□□□□ -0.28
TRIM39-201ENST00000376656 C10orf55Q5SWW7 151 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 SLC25A48Q6ZT89 311 aaKnown RBP13.31□□□□□ -0.28
TRIM39-201ENST00000376656 PDPNQ86YL7 162 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 HARBI1Q96MB7 349 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 RAI1Q7Z5J4 1906 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-201ENST00000376656 LOC400499M0QZD8 3231 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 HSBP1L1C9JCN9 74 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 FOXE3Q13461 319 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 TMEM164Q5U3C3 297 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 FER1L6-AS2Q96M78 137 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 GPR82Q96P67 336 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 MLST8Q9BVC4 326 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 REG1BP48304 166 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 PSG9Q00887 426 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 WT1-ASQ06250 92 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 C12orf54Q6X4T0 127 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 MRPL20Q9BYC9 149 aaKnown RBP13.31□□□□□ -0.28
TRIM39-201ENST00000376656 PRSS22Q9GZN4 317 aa13.31□□□□□ -0.28
TRIM39-201ENST00000376656 TMEM177Q53S58 311 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 TMEM178AQ8NBL3 297 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 ZC2HC1AQ96GY0 325 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 NCOR1P1Q9H4R4 102 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-201ENST00000376656 A8MWL6 223 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 DYSFO75923 2080 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 RPS20P60866 119 aaKnown RBP13.3□□□□□ -0.28
TRIM39-201ENST00000376656 RBMXL3Q8N7X1 1067 aaKnown RBP13.3□□□□□ -0.28
TRIM39-201ENST00000376656 CCL13Q99616 98 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 KLF12Q9Y4X4 402 aa13.3□□□□□ -0.28
TRIM39-201ENST00000376656 CGB1A6NKQ9 187 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 H3BTX0 84 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 P01737 135 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 ORM2P19652 201 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 RPUSD1Q9UJJ7 312 aaKnown RBP13.29□□□□□ -0.28
TRIM39-201ENST00000376656 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms