RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 LHX2P50458 406 aa12.92□□□□□ -0.34
OTUD3-201ENST00000375120 SPSB3Q6PJ21 355 aa12.92□□□□□ -0.34
OTUD3-201ENST00000375120 MGST2Q99735 147 aa12.92□□□□□ -0.34
OTUD3-201ENST00000375120 A0A087X0K7 114 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 TRGV3P03979 118 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
OTUD3-201ENST00000375120 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
OTUD3-201ENST00000375120 C1orf162Q8NEQ5 155 aaPredicted RBP12.91□□□□□ -0.34
OTUD3-201ENST00000375120 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
OTUD3-201ENST00000375120 IGHV3OR16-10A0A075B7F0 116 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 GAGE13Q4V321 117 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 TNFRSF18Q9Y5U5 241 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 NDUFS8O00217 210 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 FDCSPQ8NFU4 85 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
OTUD3-201ENST00000375120 B9A039 149 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
OTUD3-201ENST00000375120 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
OTUD3-201ENST00000375120 DUX5Q96PT3 197 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 IGHV2-70P01814 119 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 FOXF2Q12947 444 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 GUSBP1Q15486 140 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 POLR3KQ9Y2Y1 108 aaPredicted RBP12.9□□□□□ -0.34
OTUD3-201ENST00000375120 H7C1H1 209 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 ERVK11-1P61568 191 aa12.9□□□□□ -0.34
OTUD3-201ENST00000375120 PNRC2Q9NPJ4 139 aaKnown RBP12.9□□□□□ -0.34
OTUD3-201ENST00000375120 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.35
OTUD3-201ENST00000375120 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.35
OTUD3-201ENST00000375120 CLEC19AQ6UXS0 136 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 FGF11Q92914 225 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 FREM3P0C091 2139 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 PSG1P11464 419 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
OTUD3-201ENST00000375120 ZNF318Q5VUA4 2279 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 ZNF815PA8K554 130 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 PPBPP02775 128 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
OTUD3-201ENST00000375120 PSME4Q14997 1843 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 PPP1R27Q86WC6 154 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 ASCL2Q99929 193 aa12.89□□□□□ -0.35
OTUD3-201ENST00000375120 A0A0G2JRQ6 117 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 EFEMP2O95967 443 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 GTSCR1Q86UQ5 136 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
OTUD3-201ENST00000375120 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 FOXG1P55316 489 aaPredicted RBP12.88□□□□□ -0.35
OTUD3-201ENST00000375120 TMPRSS3P57727 454 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
OTUD3-201ENST00000375120 LCTP09848 1927 aa12.88□□□□□ -0.35
OTUD3-201ENST00000375120 A0A1B0GUS0 222 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
OTUD3-201ENST00000375120 NUP35Q8NFH5 326 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 A8MWV9 139 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 NCR2O95944 276 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 FXYD7P58549 80 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 D6R8Y8 96 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 IGLV3-19P01714 112 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
OTUD3-201ENST00000375120 CKS1BP61024 79 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 TRAV3A0A0B4J244 114 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 C9orf106Q8NAJ2 232 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 MPDZO75970 2070 aa12.87□□□□□ -0.35
OTUD3-201ENST00000375120 LOC102723996A0A087X1L8 192 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 C9orf172C9J069 976 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 PSPNO60542 156 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 LY96Q9Y6Y9 160 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 SDK2Q58EX2 2172 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 CLPSP04118 112 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 FHL1Q13642 323 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 TMEM262E9PQX1 116 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 CDKN1AP38936 164 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 H3BRM9 83 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
OTUD3-201ENST00000375120 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
OTUD3-201ENST00000375120 KIR3DL3Q8N743 410 aa12.86□□□□□ -0.35
OTUD3-201ENST00000375120 NBR2O15453 112 aa12.85□□□□□ -0.35
OTUD3-201ENST00000375120 Q6ZRM9 215 aa12.85□□□□□ -0.35
OTUD3-201ENST00000375120 MCRIP2Q9BUT9 160 aaKnown RBP12.85□□□□□ -0.35
OTUD3-201ENST00000375120 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms