RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ITGB3BPQ13352 177 aaPredicted RBP0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 DEFB113Q30KQ7 82 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 KRT222Q8N1A0 295 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 C20orf27Q9GZN8 174 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 DCSTAMPQ9H295 470 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 CYSLTR1Q9Y271 337 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 S100A4P26447 101 aaKnown RBP0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 OMPP47874 163 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 CNBPP62633 177 aaKnown RBP0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 TRAPPC6BQ86SZ2 158 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 Q8N814 137 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 OR13D1Q8NGV5 346 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 SFT2D1Q8WV19 159 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 CMSS1Q9BQ75 279 aaKnown RBP0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 CCDC90BQ9GZT6 254 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 OR51V1Q9H2C8 321 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 PARVGQ9HBI0 331 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 C14orf105Q9NVL8 296 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 PIK3C2GO75747 1445 aa0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 MYO18AQ92614 2054 aaKnown RBP0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
RNU6-560P-201ENST00000364007 NUP210LQ5VU65 1888 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 TRAV12-1A0A0B4J245 112 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 hADV38S2A0JD32 116 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 SMIM9A6NGZ8 99 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 GOLGA6L19H0YKK7 550 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 PRB4P10163 310 aaPredicted RBP0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 DEFA3P59666 94 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 LSM6P62312 80 aaKnown RBP0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 AESQ08117 197 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 C12orf74Q32Q52 190 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 C12orf45Q8N5I9 185 aaPredicted RBP0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 WFDC5Q8TCV5 224 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 UBAP1Q9NZ09 502 aa0.78□□□□□ -2.28
RNU6-560P-201ENST00000364007 UBR2Q8IWV8 1755 aa0.78□□□□□ -2.29
RNU6-560P-201ENST00000364007 DOCK4Q8N1I0 1966 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 ZNF682O95780 498 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 TCRBP04435 133 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 OR4E1P0C645 316 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 GDPD1Q8N9F7 314 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 CT55Q8WUE5 264 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 ADAT3Q96EY9 351 aaPredicted RBP0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 RNASE7Q9H1E1 156 aaKnown RBP0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 PRELID3BQ9Y3B1 194 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 V9GYY5 206 aaPredicted RBP0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 ZFYVE9O95405 1425 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 PLB1Q6P1J6 1458 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 ADGRB2O60241 1585 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 PTPRFP10586 1907 aa0.77□□□□□ -2.29
RNU6-560P-201ENST00000364007 MYO5AQ9Y4I1 1855 aaKnown RBP0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 SIP14410 1827 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 RIMBP3CA6NJZ7 1639 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 RIMBP3BA6NNM3 1639 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 RIMBP3Q9UFD9 1639 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 hCG_1818297A0A087WSY0 165 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 A8MT66 165 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 RPP14O95059 124 aaKnown RBP0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 SMIM17P0DL12 118 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 MYL6P60660 151 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 YPEL3P61236 119 aaPredicted RBP0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 IAH1Q2TAA2 248 aaPredicted RBP0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 C1orf137Q5JT78 98 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 BRMS1LQ5PSV4 323 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 C3orf56Q8N813 242 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 BORCS7Q96B45 105 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 LINC00526Q96FQ7 95 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 ACER3Q9NUN7 267 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 HS3ST2Q9Y278 367 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 SLC35A3Q9Y2D2 325 aa0.76□□□□□ -2.29
RNU6-560P-201ENST00000364007 CCDC144AA2RUR9 1427 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 CNTRLQ7Z7A1 2325 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 A0A087X0T9 212 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 M0R2N4 97 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 PROSCO94903 275 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 CASP1P29466 404 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 CEBPGP53567 150 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 GDF5OSQ5U4N7 250 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 SLC25A40Q8TBP6 338 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 CDC42SE1Q9NRR8 79 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 UQCC1Q9NVA1 299 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 IDI2-AS1Q9NZ38 188 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 EPDR1Q9UM22 224 aa0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 UTP11Q9Y3A2 253 aaKnown RBP0.75□□□□□ -2.29
RNU6-560P-201ENST00000364007 CCDC160A6NGH7 325 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 EDDM3AQ14507 147 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 TSNQ15631 228 aaKnown RBP0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 ESRGQ1W209 222 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 TEX261Q6UWH6 196 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 LCA10Q71F78 164 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 CLECL1Q8IZS7 167 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 OR6V1Q8N148 313 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 LINC00301Q8NCQ3 95 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 OR8D4Q8NGM9 314 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 PPP1R14BQ96C90 147 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 HIST1H2BLQ99880 126 aa0.74□□□□□ -2.29
RNU6-560P-201ENST00000364007 RASL12Q9NYN1 266 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms