RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TRAV5A0A0B4J249 113 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 SRRM5B3KS81 715 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 E9PLN8 166 aa12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
TRAPPC11-202ENST00000357207 A0A1B0GV72 72 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 M0R381 172 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 FOXL2NBQ6ZUU3 175 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 CHCHD1Q96BP2 118 aaKnown RBP12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 MRPL16Q9NX20 251 aaKnown RBP12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 JKAMPQ9P055 326 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 ZNF257Q9Y2Q1 563 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 A8MWP6 167 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 CRXO43186 299 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 SP9P0CG40 484 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 MTURNQ8N3F0 131 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGHV3-49A0A0A0MS15 119 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGHV2-5P01817 119 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 OR10W1Q8NGF6 305 aa12.92□□□□□ -0.34
TRAPPC11-202ENST00000357207 C3orf79P0CE67 100 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 ATP5G2Q06055 141 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 ABCA4P78363 2273 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 TMEM50AO95807 157 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGHV2-70P01814 119 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 HBDP02042 147 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 TSPOP30536 169 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 TMEM170BQ5T4T1 132 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 NTF4P34130 210 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 LCN12Q6JVE5 192 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 RPUSD1Q9UJJ7 312 aaKnown RBP12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 PSG8Q9UQ74 426 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 C9orf172C9J069 976 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 ADIPOQQ15848 244 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 PPP1R27Q86WC6 154 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 FABP5P3A8MUU1 101 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGKV3-15P01624 115 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 RNFT1Q5M7Z0 435 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 PAPPA-AS1Q5QFB9 102 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 Q6P435 159 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 SEMA5BQ9P283 1151 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■■■□ 23.8
TRAPPC11-202ENST00000357207 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 FAM159AQ6UWV7 190 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 DYNLRB2Q8TF09 96 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 LINC00473A8K010 186 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGKV1D-33P01593 117 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 IGKV1-33P01594 117 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 C20orf204Q6ZNR8 217 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 ORAOV1Q8WV07 137 aa12.9□□□□□ -0.34
TRAPPC11-202ENST00000357207 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 LILRA1O75019 489 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 CACNG7P62955 275 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 TRAV3A0A0B4J244 114 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 GFRA3O60609 400 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 RNF125Q96EQ8 232 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 PPP1R17O96001 155 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 SELLP14151 372 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 SEC11AP67812 179 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 NHP2Q9NX24 153 aaKnown RBP12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 NTN3O00634 580 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 EREGO14944 169 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 FOXH1O75593 365 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 IL18BPO95998 194 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
TRAPPC11-202ENST00000357207 IGKV1-6A0A0C4DH72 117 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 BSPH1Q075Z2 132 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 AMMECR1LQ6DCA0 310 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 FAM181BA6NEQ2 426 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 LIME1Q9H400 295 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 BEX4Q9NWD9 120 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 TYMSP04818 313 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 LEPP41159 167 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 ZCCHC24Q8N2G6 241 aaKnown RBP12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 OR5AN1Q8NGI8 311 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
TRAPPC11-202ENST00000357207 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms