RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 APOC4P55056 127 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 TNFRSF9Q07011 255 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 SPANXN2Q5MJ10 180 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 Q6ZWC4 215 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 HSPB7Q9UBY9 170 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 SHPKQ9UHJ6 478 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 U3KQE9 123 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 KIR2DL5BA0A0G2JN68 375 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 KIR2DL5BA0A0G2JPC4 375 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 NPY1RP25929 384 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 DEFB131AP59861 70 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 USF2Q15853 346 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 TMED4Q7Z7H5 227 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 KIR2DL5AQ8N109 375 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 NPIPB3Q92617 1050 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 SDHCQ99643 169 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.45
PDLIM7-201ENST00000355572 K7EQG2 157 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 PITX3O75364 302 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 P2RY1P47900 373 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 PMS2P11Q13670 270 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 SMCO1Q147U7 214 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 CCDC32Q9BV29 185 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 SRRQ9GZT4 340 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 KCNIP3Q9Y2W7 256 aa12.26□□□□□ -0.45
PDLIM7-201ENST00000355572 EPPK1P58107 5090 aaKnown RBP12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 IGKV1D-37A0A075B6S9 117 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 NPPCP23582 126 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 OR10J1P30954 320 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 CCR6P51684 374 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 PPP1R1AQ13522 171 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 BAK1Q16611 211 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 TOMM5Q8N4H5 51 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 STPG3Q8N7X2 389 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 RNASEH2CQ8TDP1 164 aaKnown RBP12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 DCANP1Q8TF63 244 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 GLMPQ8WWB7 406 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 ACY3Q96HD9 319 aa12.25□□□□□ -0.45
PDLIM7-201ENST00000355572 UBE2CO00762 179 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 BMI1P35226 326 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 LGI3Q8N145 548 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 OR1S2Q8NGQ3 325 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 METTL26Q96S19 204 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
PDLIM7-201ENST00000355572 RPS10-NUDT3A0A1W2PQS6 291 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 KNCNA6PVL3 124 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 UPK1BO75841 260 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 IFNA10P01566 189 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 ZNF688P0C7X2 276 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 IAPPP10997 89 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 SLC25A4P12235 298 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 SCGB3A2Q96PL1 93 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
PDLIM7-201ENST00000355572 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 MPTX1A8MV57 137 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 DNASE2O00115 360 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 IL4P05112 153 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 PSG1P11464 419 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 VAMP1P23763 118 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 TMEM128Q5BJH2 165 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 LRTM2Q8N967 370 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 OR1S1Q8NH92 325 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
PDLIM7-201ENST00000355572 TRAV2A0A0B4J234 112 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 DEFB4AO15263 64 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 SFT2D2O95562 160 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 TOMM40O96008 361 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 C4BPBP20851 252 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 BTCP35070 178 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 ZNF90Q03938 601 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 GAMTQ14353 236 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 OR51G1Q8NGK1 321 aa12.21□□□□□ -0.45
PDLIM7-201ENST00000355572 IGKV1OR2-108A0A075B7D4 117 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 PRSS46E5RG02 174 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 CA1P00915 261 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 DEFB1P60022 68 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 Q8WTZ3 238 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 MAGT1Q9H0U3 335 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 U3KQ87 197 aa12.2□□□□□ -0.46
PDLIM7-201ENST00000355572 A0A1W2PS18 150 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 BUB3O43684 328 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 ADAP1O75689 374 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 HOXB5P09067 269 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 ANXA3P12429 323 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 AP3S2P59780 193 aa12.19□□□□□ -0.46
PDLIM7-201ENST00000355572 TMEM231Q9H6L2 316 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms