RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZNF883P0CG24 379 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 IGFBP2P18065 325 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 C1QL2Q7Z5L3 287 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 LINC00587B1AMM8 73 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 ZNF250P15622 560 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 UCP3P55916 312 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 FABP5P3A8MUU1 101 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 IGKCP01834 107 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 SSBP2P81877 361 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-201ENST00000347662 FAM27BQ5VT28 67 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 ZNF474Q6S9Z5 364 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-201ENST00000347662 DRAM1Q8N682 238 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 PTGDSP41222 190 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 TIMM23BQ5SRD1 257 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 SLC25A38Q96DW6 304 aa9.91□□□□□ -0.82
TRAF3-201ENST00000347662 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 MGAMO43451 1857 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 GNG5P63218 68 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 LINC00527Q9UJ94 153 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 CA7P43166 264 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 SPACA3Q8IXA5 215 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 BAALCQ8WXS3 180 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 ASCL2Q99929 193 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
TRAF3-201ENST00000347662 FAM209AQ5JX71 171 aa9.9□□□□□ -0.83
TRAF3-201ENST00000347662 FAM201AQ5SY85 155 aa9.9□□□□□ -0.83
TRAF3-201ENST00000347662 KLHDC2Q9Y2U9 406 aa9.9□□□□□ -0.83
TRAF3-201ENST00000347662 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 NR2C2APQ86WQ0 139 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 RND3P61587 244 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 ZNF345Q14585 488 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 RFLNBQ8N5W9 214 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 OSR1Q8TAX0 266 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 CUL9Q8IWT3 2517 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 TMEM238C9JI98 176 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 CRYBA2P53672 197 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 RPL36AP83881 106 aaKnown RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 TAL2Q16559 108 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 RPL36ALQ969Q0 106 aaKnown RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 FOXD3Q9UJU5 478 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
TRAF3-201ENST00000347662 ACACBO00763 2458 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 MMP23AO75900 390 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 IGHG3P01860 377 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 ZNF876PQ49A33 203 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 SIGLEC15Q6ZMC9 328 aa9.89□□□□□ -0.83
TRAF3-201ENST00000347662 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 RASL10AQ92737 203 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 RALGAPA2Q2PPJ7 1873 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 TRAV40A0A0B4J280 105 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 CIARTQ8N365 385 aaPredicted RBP9.88□□□□□ -0.83
TRAF3-201ENST00000347662 IMMP1LQ96LU5 166 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 A0A0G2JMM0 328 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 A0A1W2PPB8 328 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 A0A1W2PRS3 328 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 KIR3DP1A8MWS1 328 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 POC1AQ8NBT0 407 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 NPIPB13A6NJU9 1138 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 DOCK4Q8N1I0 1966 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 F5H768 121 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 RHOGP84095 191 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 CFHR3Q02985 330 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 TEX43Q6ZNM6 134 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 IFI27L2Q9H2X8 130 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 GATAD1Q8WUU5 269 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 GGACTQ9BVM4 153 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 GTSF1LQ9H1H1 148 aa9.88□□□□□ -0.83
TRAF3-201ENST00000347662 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 GATA2P23769 480 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-201ENST00000347662 TRBV5-3A0A0A0MS03 114 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 CSRP1P21291 193 aaKnown RBP9.87□□□□□ -0.83
TRAF3-201ENST00000347662 TFF3Q07654 80 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 FAM90A26D6RGX4 464 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 C8orf82Q6P1X6 216 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-201ENST00000347662 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 DEFB105AQ8NG35 78 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 DOCK11Q5JSL3 2073 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 GATA4P43694 442 aa9.87□□□□□ -0.83
TRAF3-201ENST00000347662 CMC4P56277 68 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-201ENST00000347662 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
TRAF3-201ENST00000347662 A8MXK9 166 aa9.86□□□□□ -0.83
TRAF3-201ENST00000347662 NGFRP08138 427 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 725 ms