RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C10orf142B7Z368 130 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 F2Z2F3 143 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 IGKV3-15P01624 115 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 WNT2P09544 360 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 Q6ZN92 141 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 TCF24Q7RTU0 167 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 RNF2Q99496 336 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 SNHG12Q9BXW3 62 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 PRDM13Q9H4Q3 707 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 HIF1ANQ9NWT6 349 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 DIRC3C9JPN6 131 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 CCL21O00585 134 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 NPPCP23582 126 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 ERVK11-1P61568 191 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 TIMM23BQ5SRD1 257 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 ZNF664Q8N3J9 261 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 ALKBH7Q9BT30 221 aaPredicted RBP6.75□□□□□ -1.33
HPS4-201ENST00000336873 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 WASHC3Q9Y3C0 194 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 DSCAMO60469 2012 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 A0A087WWC5 75 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 M0R2Z0 102 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 PROP1O75360 226 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 TNFSF13O75888 250 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
HPS4-201ENST00000336873 FXYD7P58549 80 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 OR5R1Q8NH85 324 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 NAGKQ9UJ70 344 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 SLC25A15Q9Y619 301 aa6.75□□□□□ -1.33
HPS4-201ENST00000336873 ZNF207O43670 478 aaKnown RBP6.74□□□□□ -1.33
HPS4-201ENST00000336873 NUPR1O60356 82 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 CNTFRP26992 372 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 RELBQ01201 579 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 PNKDQ8N490 385 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 IFI27L2Q9H2X8 130 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 TPSG1Q9NRR2 321 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 LINC00527Q9UJ94 153 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 TIMM9Q9Y5J7 89 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 DCHS2Q6V1P9 2916 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 ADAMTS20P59510 1910 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
HPS4-201ENST00000336873 LMO1P25800 156 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 ZNF138P52744 262 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 LYPD6BQ8NI32 183 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 SLC25A33Q9BSK2 321 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 SCNM1Q9BWG6 230 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 SH2D7A6NKC9 451 aaPredicted RBP6.74□□□□□ -1.33
HPS4-201ENST00000336873 CD3EP07766 207 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 BRWD1-AS2P59051 145 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 TEX38Q6PEX7 206 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 SSX8Q7RTT4 187 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 ACANP16112 2415 aa6.74□□□□□ -1.33
HPS4-201ENST00000336873 A8MWP6 167 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 K7ERU9 68 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 C8orf88P0DMB2 117 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 SSBP2P81877 361 aaPredicted RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 ECSCRQ19T08 205 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 TMEM167BQ9NRX6 74 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 C15orf61A6NNL5 157 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 ITGB1BP1O14713 200 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 APCSP02743 223 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 HNRNPA3P51991 378 aaKnown RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 C1orf229Q6ZS94 237 aaPredicted RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 TMEM106BQ9NUM4 274 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 A0A1W2PN81 502 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 HTR1DP28221 377 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 RNASE8Q8TDE3 154 aaKnown RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 UBTD1Q9HAC8 227 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 PLSCR4Q9NRQ2 329 aa6.73□□□□□ -1.33
HPS4-201ENST00000336873 TBL2Q9Y4P3 447 aaKnown RBP6.73□□□□□ -1.33
HPS4-201ENST00000336873 TRBV20OR9-2A0A075B6H5 130 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 DPRXA6NFQ7 191 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 C17orf100A8MU93 164 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 GNG7O60262 68 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 YPEL1O60688 119 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
HPS4-201ENST00000336873 AREGP15514 252 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 TDGF1P3P51864 188 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 RIPPLY3P57055 190 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 TMEM177Q53S58 311 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 OR4C13Q8NGP0 309 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 Q8TCH9 128 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 YPEL2Q96QA6 119 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 RASL11BQ9BPW5 248 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 GP6Q9HCN6 339 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 DKK4Q9UBT3 224 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 FN1P02751 2386 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms