RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CCL19Q99731 98 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHG3P01860 377 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 ASIPP42127 132 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 LINC01551Q86U37 167 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 ZNF581Q9P0T4 197 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 GNG5P63218 68 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 AMMECR1LQ6DCA0 310 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 SLC50A1Q9BRV3 221 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 M0R381 172 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 PRSS2P07478 247 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 C19orf54Q5BKX5 351 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 FAM74A4Q5TZK3 123 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 ASCL2Q99929 193 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 PEF1Q9UBV8 284 aaKnown RBP14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 C9JCJ5 164 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 LEMD1Q68G75 181 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 ZNF600Q6ZNG1 722 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 VOPP1Q96AW1 172 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 COQ2Q96H96 371 aa14.11□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGKV3-15P01624 115 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 LGALS3P17931 250 aaKnown RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 ZNF56Q15929 161 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 HIST3H2BBQ8N257 126 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 OR10W1Q8NGF6 305 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 C18orf15Q96N68 181 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 AGMATQ9BSE5 352 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 ANAPC10Q9UM13 185 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 F11RQ9Y624 299 aaKnown RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 ANAPC1Q9H1A4 1944 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 MBD3L4A6NDZ8 208 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 MBD3L3A6NE82 208 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 MBD3L5A6NJ08 208 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 SAMD13Q5VXD3 122 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 CLEC19AQ6UXS0 136 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 CENPVQ7Z7K6 275 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 MBD3L2Q8NHZ7 208 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 TIMM23O14925 209 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 FAM168AQ92567 244 aa14.1□□□□□ -0.15
TRAPPC11-201ENST00000334690 MED13LQ71F56 2210 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 TSKUQ8WUA8 353 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 MBNL3Q9NUK0 354 aaKnown RBP14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 RRN3P1Q2M238 152 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 C5orf24Q7Z6I8 188 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 C8orf46Q8TAG6 207 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 TMEM167AQ8TBQ9 72 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 PSG8Q9UQ74 426 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 FAM169BQ8N8A8 192 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 DMRTA2Q96SC8 542 aa14.09□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHV3OR16-8A0A075B7F1 116 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 LINC00473A8K010 186 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 H7C1H1 209 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 CEACAM4O75871 244 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 PRSS8Q16651 343 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 TMEM160Q9NX00 188 aa14.08□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHV3-66A0A0C4DH42 116 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 Q6ZRM9 215 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 ATP5L2Q7Z4Y8 100 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 NEUROG1Q92886 237 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 A0A0G2JRQ6 117 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 LYNX1G3V0Z9 82 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 LYNX1P0DP58 116 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 COL4A6Q14031 1691 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 MLNRO43193 412 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 C21orf62-AS1Q17RA5 79 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 TTC9CQ8N5M4 171 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 MGST2Q99735 147 aa14.08□□□□□ -0.16
TRAPPC11-201ENST00000334690 TRAV8-6A0A0B4J262 113 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 SEPSECSQ9HD40 501 aaKnown RBP14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 RFNGQ9Y644 331 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 TMEM178BH3BS89 294 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 DUX5Q96PT3 197 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 NOTCH4Q99466 2003 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 RNF5Q99942 180 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 PPBPP02775 128 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 CIRBPQ14011 172 aaKnown RBP14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 MUC21Q5SSG8 566 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 SSBP4Q9BWG4 385 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 C7orf69Q9H7B7 122 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 LY96Q9Y6Y9 160 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGHV1-8P0DP01 117 aa14.07□□□□□ -0.16
TRAPPC11-201ENST00000334690 AMBPP02760 352 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 THBDP07204 575 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 C20orf204Q6ZNR8 217 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 LAMTOR2Q9Y2Q5 125 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGHV3OR16-12A0A075B7B8 117 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 C15orf62A8K5M9 175 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 CDKN1AP38936 164 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 TMEM200BQ69YZ2 307 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 SPACA3Q8IXA5 215 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 CRXO43186 299 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 LINC00614P0C842 121 aa14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 SLC25A48Q6ZT89 311 aaKnown RBP14.06□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGHV2-26A0A0B4J1V2 119 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGKV3-20P01619 116 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms