RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NUDT3O95989 172 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 AMY1AP04745 511 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 SLC25A34Q6PIV7 304 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 PNKDQ8N490 385 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 OR9G1Q8NH87 305 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 IGHV3OR16-10A0A075B7F0 116 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 NDUFS7O75251 213 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 CA2P00918 260 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 C8orf88P0DMB2 117 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 CCL3L1P16619 93 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 DCAF16Q9NXF7 216 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 KIAA1549Q9HCM3 1950 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 CA1P00915 261 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-201ENST00000334136 GBGT1Q8N5D6 347 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 CLEC7AQ9BXN2 247 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 LINC00312Q9Y6C7 94 aa9.7□□□□□ -0.86
HDAC6-201ENST00000334136 A0A1B0GW64 132 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 IGKV1-5P01602 117 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 RND2P52198 227 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 VSTM2AQ8TAG5 236 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 JPT1Q9UK76 154 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 A8MWP6 167 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 PLA2G2AP14555 144 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 SLC25A16P16260 332 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 GATA4P43694 442 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 LINC00205P59089 165 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM177Q53S58 311 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 MIR17HGQ75NE6 70 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 KCNS1Q96KK3 526 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 RBM14Q96PK6 669 aaKnown RBP9.69□□□□□ -0.86
HDAC6-201ENST00000334136 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 IGLV3-1P01715 115 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 REG1AP05451 166 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 Q5PR19 223 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 YAE1D1Q9NRH1 226 aa9.69□□□□□ -0.86
HDAC6-201ENST00000334136 USP9YO00507 2555 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-201ENST00000334136 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
HDAC6-201ENST00000334136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.68□□□□□ -0.86
HDAC6-201ENST00000334136 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 NDUFS8O00217 210 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 C12orf54Q6X4T0 127 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 CD177Q8N6Q3 437 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-201ENST00000334136 C1RLQ9NZP8 487 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 SPEGQ15772 3267 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 DLEU1O43261 78 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 PSPNO60542 156 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 NPIPB3Q92617 1050 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 DOPEY1Q5JWR5 2465 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 ZNF785A8K8V0 405 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 TEX38Q6PEX7 206 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 METRNQ9UJH8 293 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 MYO15AQ9UKN7 3530 aa9.68□□□□□ -0.86
HDAC6-201ENST00000334136 RIGQ13278 110 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 C19orf35Q6ZS72 473 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 WDR86Q86TI4 376 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 CDSNQ15517 529 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 C1orf194Q5T5A4 169 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 PCSK4Q6UW60 755 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 LYPD2Q6UXB3 125 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 NRGNQ92686 78 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM208Q9BTX3 173 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 IGKV1D-17A0A075B6S4 117 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 A6NDN8 102 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 B4DSR2 109 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 ORM1P02763 201 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM155Q4W5P6 130 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 ZNF788Q6ZQV5 615 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 SNHG12Q9BXW3 62 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 CHD3Q12873 2000 aaKnown RBP9.67□□□□□ -0.86
HDAC6-201ENST00000334136 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
HDAC6-201ENST00000334136 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
HDAC6-201ENST00000334136 AKAP13Q12802 2813 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 S100A4P26447 101 aaKnown RBP9.66□□□□□ -0.86
HDAC6-201ENST00000334136 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
HDAC6-201ENST00000334136 LCN12Q6JVE5 192 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 STXBP6Q8NFX7 210 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 Q8TCH9 128 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 TMEM70Q9BUB7 260 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 MGAQ8IWI9 3026 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 SLC25A17O43808 307 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 HYPMO75409 117 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-201ENST00000334136 IL15RAQ13261 267 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 ZNF497Q6ZNH5 498 aa9.66□□□□□ -0.86
HDAC6-201ENST00000334136 RASL11BQ9BPW5 248 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms