RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 FAM3BP58499 235 aaPredicted RBP16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 DSCR9P59020 149 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 GAMTQ14353 236 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 MIC13Q5XKP0 118 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 SUB1P53999 127 aaKnown RBP eCLIP16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 COA6Q5JTJ3 125 aaKnown RBP16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 PACRGQ96M98 296 aaPredicted RBP16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 PFDN5Q99471 154 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 KCNIP2Q9NS61 270 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 CELSR2Q9HCU4 2923 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 CSMD2Q7Z408 3487 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 A0A1W2PPV4 95 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 TEX22C9J3V5 150 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 RD3LP0DJH9 198 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 CLEC12BQ2HXU8 276 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 TMEM144Q7Z5S9 345 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 LINC01551Q86U37 167 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 SSMEM1Q8WWF3 244 aa16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 SRSF12Q8WXF0 261 aaKnown RBP16.14■□□□□ 0.17
RIPPLY3-201ENST00000329553 NPFFO15130 113 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 TYMSP04818 313 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 ATP5G3P48201 142 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 EBI3Q14213 229 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 Q8N6K4 173 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 CACNG8Q8WXS5 425 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 PXMP4Q9Y6I8 212 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 IGKV1OR2-108A0A075B7D4 117 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 A0A1W2PPQ1 181 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 CD99P14209 185 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 GPX4P36969 197 aaPredicted RBP16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 C19orf35Q6ZS72 473 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 OR2T6Q8NHC8 308 aa16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 RNASEH2CQ8TDP1 164 aaKnown RBP16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 FNDC4Q9H6D8 234 aaPredicted RBP16.13■□□□□ 0.17
RIPPLY3-201ENST00000329553 F6UZH7 168 aa16.12■□□□□ 0.17
RIPPLY3-201ENST00000329553 STAG3L2P0CL84 134 aa16.12■□□□□ 0.17
RIPPLY3-201ENST00000329553 STAG3L3P0CL85 134 aa16.12■□□□□ 0.17
RIPPLY3-201ENST00000329553 MRPL41Q8IXM3 137 aaKnown RBP16.12■□□□□ 0.17
RIPPLY3-201ENST00000329553 OR1P1Q8NH06 330 aa16.12■□□□□ 0.17
RIPPLY3-201ENST00000329553 MFAP2P55001 183 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 UBE2G2P60604 165 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 C5orf64Q2M2E5 130 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 C9orf152Q5JTZ5 239 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 ACTL10Q5JWF8 245 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 FAM120AOSQ5T036 256 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 TXNDC17Q9BRA2 123 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 USP9YO00507 2555 aaPredicted RBP16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 CNIH1O95406 144 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 PLA2G2AP14555 144 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 RAB31Q13636 194 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 CST9LP1Q5W188 147 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 ZNF114Q8NC26 417 aa16.11■□□□□ 0.17
RIPPLY3-201ENST00000329553 IGHV3OR16-10A0A075B7F0 116 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 GATCO43716 136 aaKnown RBP16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 NDUFB4O95168 129 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 MSMBP08118 114 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 PVRIGQ6DKI7 326 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 ACY3Q96HD9 319 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 NCBP2LA6PVI3 153 aaKnown RBP16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 IGHV3-48P01763 117 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 ARL14EPLP0DKL9 152 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 TMEM11P17152 192 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 RPL29P47914 159 aaKnown RBP16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 RUSC1-AS1Q66K80 236 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 KCNIP4Q6PIL6 250 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 STPG3Q8N7X2 389 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 DERL1Q9BUN8 251 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 SLC45A2Q9UMX9 530 aa16.1■□□□□ 0.17
RIPPLY3-201ENST00000329553 CXorf1O96002 111 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 AMBPP02760 352 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 SLC25A16P16260 332 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 MAP1AP78559 2803 aaPredicted RBP16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 XKRY2A2RUG3 117 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 LINC00869P0C866 280 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 FAM106CPP0CH98 169 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 PRR20EP86478 221 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 PRR20CP86479 221 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 PRR20DP86480 221 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 PRR20BP86481 221 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 PRR20AP86496 221 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 FXYD3Q14802 87 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 OR5T1Q8NG75 326 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 OR5R1Q8NH85 324 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 SLC35E1Q96K37 410 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 IMMP2LQ96T52 175 aa16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 ZMAT5Q9UDW3 170 aaKnown RBP16.09■□□□□ 0.17
RIPPLY3-201ENST00000329553 IGHV1-69DA0A0B4J2H0 117 aa16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 IGHV1-69P01742 117 aa16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 OR10J1P30954 320 aa16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 MISP3Q96FF7 219 aa16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 MRPL36Q9P0J6 103 aaKnown RBP16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 F11RQ9Y624 299 aaKnown RBP16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 CENPEQ02224 2701 aa16.08■□□□□ 0.16
RIPPLY3-201ENST00000329553 J3QKU1 62 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 BRS3P32247 399 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 FAM103A1Q9BTL3 118 aaKnown RBP16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 FUT9Q9Y231 359 aa16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 ANKRD17O75179 2603 aaKnown RBP16.07■□□□□ 0.16
RIPPLY3-201ENST00000329553 PTPN13Q12923 2485 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms