RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ZNF253O75346 499 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 CD33P20138 364 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 CAMLGP49069 296 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 LINC00205P59089 165 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 RHOBP62745 196 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 OR10W1Q8NGF6 305 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 DUX5Q96PT3 197 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 TXNDC17Q9BRA2 123 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 GNB4Q9HAV0 340 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 COX7A2P2O60397 106 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 SEC11BP0C7V7 166 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 METTL15P1P0C7V9 234 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 PAX9P55771 341 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 TMEM41BQ5BJD5 291 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 AKR1C8PQ5T2L2 129 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 BTNL8Q6UX41 500 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 WDR89Q96FK6 387 aaPredicted RBP4.01□□□□□ -1.77
LRIT3-201ENST00000327908 ACY3Q96HD9 319 aa4.01□□□□□ -1.77
LRIT3-201ENST00000327908 FAM103A1Q9BTL3 118 aaKnown RBP4.01□□□□□ -1.77
LRIT3-201ENST00000327908 NKX6-2Q9C056 277 aaPredicted RBP4.01□□□□□ -1.77
LRIT3-201ENST00000327908 ABCA12Q86UK0 2595 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 FAM24AA6NFZ4 105 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 OR4C46A6NHA9 309 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 IFNA1P01562 189 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 RPLP1P05386 114 aaKnown RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 IGLC1P0CG04 106 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 C8orf88P0DMB2 117 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 CD28P10747 220 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 KHDC3LQ587J8 217 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 LCNL1Q6ZST4 164 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PRIMA1Q86XR5 153 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 OR5C1Q8NGR4 320 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 TAF15Q92804 592 aaKnown RBP eCLIP4□□□□□ -1.77
LRIT3-201ENST00000327908 SLC50A1Q9BRV3 221 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 ACTR3CQ9C0K3 210 aaPredicted RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 WDR61Q9GZS3 305 aaKnown RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 WNK2Q9Y3S1 2297 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 APCP25054 2843 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PRRC2CQ9Y520 2896 aaKnown RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 SERTM2A0A1B0GWG4 89 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 IGSF23A1L1A6 192 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PRSS46E5RG02 174 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 WIPF1O43516 503 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 SIX6O95475 246 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 GPR183P32249 361 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 BLOC1S1P78537 153 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 KLF5Q13887 457 aaPredicted RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 GAMTQ14353 236 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 FAM74A1Q5RGS3 127 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 CLEC19AQ6UXS0 136 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 WFDC9Q8NEX5 89 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 NPIPB3Q92617 1050 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 MRPL53Q96EL3 112 aaKnown RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 MS4A10Q96PG2 267 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 CITED2Q99967 270 aaPredicted RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 RNF126Q9BV68 326 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PRR13Q9NZ81 148 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PXMP4Q9Y6I8 212 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PDZD2O15018 2839 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 RNF222A6NCQ9 220 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 AMBPP02760 352 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 PQLC2Q6ZP29 291 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 RNF125Q96EQ8 232 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 ST6GAL2Q96JF0 529 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 SPAG8Q99932 426 aaPredicted RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 TMEM167BQ9NRX6 74 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 TMEM14CQ9P0S9 112 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 LSM4Q9Y4Z0 139 aaKnown RBP4□□□□□ -1.77
LRIT3-201ENST00000327908 LOC400499M0QZD8 3231 aa4□□□□□ -1.77
LRIT3-201ENST00000327908 ARHGAP32A7KAX9 2087 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 ASH1LQ9NR48 2969 aaKnown RBP3.99□□□□□ -1.77
LRIT3-201ENST00000327908 TRAV14DV4A0A0A6YYC5 116 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 A0A1B0GW64 132 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 REG1AP05451 166 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 CLEC3BP05452 202 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 ATF4P18848 351 aaPredicted RBP3.99□□□□□ -1.77
LRIT3-201ENST00000327908 HOXD3P31249 432 aaPredicted RBP3.99□□□□□ -1.77
LRIT3-201ENST00000327908 PDE6HQ13956 83 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 KIAA0141Q14154 515 aaPredicted RBP3.99□□□□□ -1.77
LRIT3-201ENST00000327908 TMUB2Q71RG4 321 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 LYPD1Q8N2G4 141 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 OR9G4Q8NGQ1 327 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 ARV1Q9H2C2 271 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 SLC39A9Q9NUM3 307 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 OR5AC2Q9NZP5 309 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 IGHV7-4-1A0A0J9YVY3 117 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 UBE2L5PA0A1B0GUS4 154 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 A0A1W2PPV4 95 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 YIF1AO95070 293 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 IFNA7P01567 189 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 M6PRP20645 277 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 B2MP61769 119 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 PSG9Q00887 426 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 IZUMO4Q1ZYL8 232 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 NSUN5P1Q3KNT7 163 aa3.99□□□□□ -1.77
LRIT3-201ENST00000327908 C10orf113Q5VZT2 155 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms