RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 MRPL36Q9P0J6 103 aaKnown RBP17.38■□□□□ 0.37
CCDC85B-201ENST00000312579 CYB5BO43169 146 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 TMEM182Q6ZP80 229 aaPredicted RBP17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 RNASEH2CQ8TDP1 164 aaKnown RBP17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 MDFIQ99750 246 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 THYN1Q9P016 225 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 FAM223BA6NKX1 122 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 FAM223AQ8IWN6 122 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 PSMG3Q9BT73 122 aaPredicted RBP17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 RSG1Q9BU20 258 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 PLA2G2EQ9NZK7 142 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 WDR83OSQ9Y284 106 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 RFNGQ9Y644 331 aa17.37■□□□□ 0.37
CCDC85B-201ENST00000312579 COL6A5A8TX70 2615 aa17.36■□□□□ 0.37
CCDC85B-201ENST00000312579 ZNF705EA8MWA4 302 aaPredicted RBP17.36■□□□□ 0.37
CCDC85B-201ENST00000312579 FNDC10F2Z333 226 aa17.36■□□□□ 0.37
CCDC85B-201ENST00000312579 BTNL8Q6UX41 500 aa17.36■□□□□ 0.37
CCDC85B-201ENST00000312579 CORTO00230 105 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 RAB5CP51148 216 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 AKR1C1Q04828 323 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 CD69Q07108 199 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 SLC7A5P1Q8MH63 180 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 USMG5Q96IX5 58 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 NPVFQ9HCQ7 196 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 TIMM9Q9Y5J7 89 aa17.35■□□□□ 0.37
CCDC85B-201ENST00000312579 A0A0G2JLM5 398 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 TRBV12-3P01733 135 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 GPX4P36969 197 aaPredicted RBP17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 TREML4Q6UXN2 200 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 SLC16A13Q7RTY0 426 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 ZNF709Q8N972 641 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 CXorf58Q96LI9 332 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 UBE2E2Q96LR5 201 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 CCDC140Q96MF4 163 aa17.34■□□□□ 0.37
CCDC85B-201ENST00000312579 ANKRD34BA5PLL1 514 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 LINC00862A6NCI5 91 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 UMAD1C9J7I0 102 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 C17orf112F2Z3M2 114 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 MPDU1O75352 247 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 NSUN5P1Q3KNT7 163 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 AKR1C8PQ5T2L2 129 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 ACSM6Q6P461 480 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 C12orf54Q6X4T0 127 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 ZNF502Q8TBZ5 544 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 VN1R17PQ8TDU5 208 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 CACNG8Q8WXS5 425 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 EEF1AKMT3Q96AZ1 226 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 SAT2Q96F10 170 aaPredicted RBP17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 SLC35E1Q96K37 410 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 NPCDR1Q9BY65 106 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 C21orf62Q9NYP8 219 aa17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 TSSC4Q9Y5U2 329 aaPredicted RBP17.33■□□□□ 0.37
CCDC85B-201ENST00000312579 ADARB2-AS1A8MUL3 147 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 F8W735 103 aaPredicted RBP17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 BLOC1S1P78537 153 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 DEFB136Q30KP8 78 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 CLEC19AQ6UXS0 136 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 KLHL30-AS1Q8NEE0 82 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 CITED1Q99966 193 aa17.32■□□□□ 0.36
CCDC85B-201ENST00000312579 CDX1P47902 265 aaPredicted RBP17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 CAMLGP49069 296 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 GAMTQ14353 236 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 ZNF343Q6P1L6 599 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 ACY3Q96HD9 319 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 OR2T8A6NH00 312 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 NUDT19A8MXV4 375 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 PPP5D1E7EU14 171 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 RND2P52198 227 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 SERF2P84101 59 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 Q56UQ5 140 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 ETFRF1Q6IPR1 90 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 TEPPQ6URK8 271 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 Q6ZRG5 221 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 C8orf86Q6ZUL3 223 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 C3orf56Q8N813 242 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 DUX3Q96PT4 197 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 PFDN2Q9UHV9 154 aa17.31■□□□□ 0.36
CCDC85B-201ENST00000312579 ATP6V1G1O75348 118 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 CLEC3BP05452 202 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 LGALS1P09382 135 aaKnown RBP17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 GPR183P32249 361 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 MFAP4P55083 255 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 RAB31Q13636 194 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 TMEM144Q7Z5S9 345 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 FAM213BQ8TBF2 198 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 NPIPB3Q92617 1050 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 ZNF747Q9BV97 191 aa17.3■□□□□ 0.36
CCDC85B-201ENST00000312579 STAB1Q9NY15 2570 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 TRBV7-1A0A0A6YYK4 115 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 I3L521 148 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 ELLP55199 621 aaPredicted RBP17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 PXDC1Q5TGL8 231 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 COMMD7Q86VX2 200 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 C4orf3Q8WVX3 66 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 MGST2Q99735 147 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 KCNIP2Q9NS61 270 aa17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 LSM4Q9Y4Z0 139 aaKnown RBP17.29■□□□□ 0.36
CCDC85B-201ENST00000312579 ZNF616Q08AN1 781 aa17.28■□□□□ 0.36
CCDC85B-201ENST00000312579 DPPA3Q6W0C5 159 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms