RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 MRPL52Q86TS9 123 aaKnown RBP11.38□□□□□ -0.59
CLCN6-201ENST00000312413 GTSCR1Q86UQ5 136 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 FDCSPQ8NFU4 85 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 GGTLC1Q9BX51 225 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 LYPD3O95274 346 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 GUSBP1Q15486 140 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 GLMPQ8WWB7 406 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-201ENST00000312413 C17orf100A8MU93 164 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
CLCN6-201ENST00000312413 CELA3BP08861 270 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 C8orf46Q8TAG6 207 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 NEU4Q8WWR8 484 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-201ENST00000312413 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 PRTN3P24158 256 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 LAGE3Q14657 143 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 MPV17L2Q567V2 206 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 MALP21145 153 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 ZNF319Q9P2F9 582 aa11.37□□□□□ -0.59
CLCN6-201ENST00000312413 MYOD1P15172 320 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM249Q2WGJ8 235 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 LURAP1LQ8IV03 231 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 SCN4AP35499 1836 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 GAS1P54826 345 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 BSPH1Q075Z2 132 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 TRAV5A0A0B4J249 113 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM155Q4W5P6 130 aa11.36□□□□□ -0.59
CLCN6-201ENST00000312413 RPP25LQ8N5L8 163 aaKnown RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 MRPS18CQ9Y3D5 142 aaKnown RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 TRIP12Q14669 1992 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-201ENST00000312413 A0A0G2JMM0 328 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 A0A1W2PPB8 328 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 KIR3DP1A8MWS1 328 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 ESDP10768 282 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 SRSF7Q16629 238 aaKnown RBP eCLIP11.35□□□□□ -0.594e-7■■■■□ 26.7
CLCN6-201ENST00000312413 TMEM86BQ8N661 226 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 NEUROG3Q9Y4Z2 214 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 DOCK5Q9H7D0 1870 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 SCN8AQ9UQD0 1980 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 DUSP14O95147 198 aaKnown RBP11.35□□□□□ -0.59
CLCN6-201ENST00000312413 LCN12Q6JVE5 192 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 DMRTC2Q8IXT2 367 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-201ENST00000312413 CCL19Q99731 98 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 GTSF1LQ9H1H1 148 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 A0A087X0K7 114 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 D6R8Y8 96 aa11.35□□□□□ -0.59
CLCN6-201ENST00000312413 CRPP02741 224 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 SSBP2P81877 361 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-201ENST00000312413 MYO16Q9Y6X6 1858 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 GFRA3O60609 400 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 OCIAD2Q56VL3 154 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 ZNF664Q8N3J9 261 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-201ENST00000312413 IMMP1LQ96LU5 166 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
CLCN6-201ENST00000312413 KLF17Q5JT82 389 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-201ENST00000312413 RHOGP84095 191 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 NCR2O95944 276 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 SPATA31B1PQ5VZV4 182 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
CLCN6-201ENST00000312413 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 ZNF562Q6V9R5 426 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
CLCN6-201ENST00000312413 SCN2AQ99250 2005 aa11.33□□□□□ -0.6
CLCN6-201ENST00000312413 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 IGKV1-12A0A0C4DH73 117 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 IGKV1D-12P01611 117 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 FAM166AQ6J272 317 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 OVOL1O14753 267 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
CLCN6-201ENST00000312413 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
CLCN6-201ENST00000312413 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
CLCN6-201ENST00000312413 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms