RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
SSH3-201ENST00000308127 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 BORCS7Q96B45 105 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 TRAV17A0A0B4J275 112 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 SMIM27A0A1W2PRY6 76 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 M0QZK8 103 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 CTRLP40313 264 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 OR4B1Q8NGF8 309 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 DNAJC4Q9NNZ3 241 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 LY96Q9Y6Y9 160 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 IGLC3P0DOY3 106 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 ZNF137PP52743 207 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
SSH3-201ENST00000308127 A0A1B0GWJ7 208 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 HIGD1CA8MV81 97 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 HSBP1O75506 76 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 FCN3O75636 299 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 GLRXP35754 106 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 PLA2G2CQ5R387 149 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
SSH3-201ENST00000308127 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
SSH3-201ENST00000308127 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 H0Y8G0 127 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 EBLN2Q6P2I7 272 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 SAP30LQ9HAJ7 183 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 IZUMO1RA6ND01 250 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 M0R2Z0 102 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 NDUFB8O95169 186 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 MT-ND6P03923 174 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 OR10J3Q5JRS4 329 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 OR1B1Q8NGR6 318 aa13.41□□□□□ -0.26
SSH3-201ENST00000308127 A0A1W2PRE2 83 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 ENSAO43768 121 aaKnown RBP13.4□□□□□ -0.26
SSH3-201ENST00000308127 SLC25A17O43808 307 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
SSH3-201ENST00000308127 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 ZNF329Q86UD4 541 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 FAM215AQ9Y5M1 114 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 MALRD1Q5VYJ5 2156 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 PEX7O00628 323 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 PRRX1P54821 245 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 LINC00305Q7Z4B0 112 aa13.4□□□□□ -0.26
SSH3-201ENST00000308127 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
SSH3-201ENST00000308127 PSMB11A5LHX3 300 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 K7EM74 188 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 CFHR2P36980 270 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 ZNF138P52744 262 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 ZNF788Q6ZQV5 615 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 ADTRPQ96IZ2 230 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 SLC25A5P05141 298 aaKnown RBP13.39□□□□□ -0.27
SSH3-201ENST00000308127 ERHP84090 104 aaKnown RBP13.39□□□□□ -0.27
SSH3-201ENST00000308127 OR10X1Q8NGY0 326 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 CCL17Q92583 94 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 ZNF430Q9H8G1 570 aaPredicted RBP13.39□□□□□ -0.27
SSH3-201ENST00000308127 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 ZNF292O60281 2723 aa13.39□□□□□ -0.27
SSH3-201ENST00000308127 TRAV8-1A0A0A6YYK1 113 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 H0YJW9 148 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 M0R296 226 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 BTF3P20290 206 aaKnown RBP13.38□□□□□ -0.27
SSH3-201ENST00000308127 LYPD2Q6UXB3 125 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.38□□□□□ -0.27
SSH3-201ENST00000308127 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 UQCR10Q9UDW1 63 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 DLL1O00548 723 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 TBR1Q16650 682 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
SSH3-201ENST00000308127 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
SSH3-201ENST00000308127 IGKV1D-37A0A075B6S9 117 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 PGPA6NDG6 321 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 APOA2P02652 100 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 RPL19P84098 196 aaKnown RBP13.38□□□□□ -0.27
SSH3-201ENST00000308127 POU2AF1Q16633 256 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 WFDC8Q8IUA0 241 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 OR8B2Q96RD0 313 aa13.38□□□□□ -0.27
SSH3-201ENST00000308127 CNTFRP26992 372 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 UBE2G1P62253 170 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 PGLYRP4Q96LB8 373 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 TNFRSF19Q9NS68 423 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 TIMM23BQ5SRD1 257 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 FXYD5Q96DB9 178 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 BET1LQ9NYM9 111 aa13.37□□□□□ -0.27
SSH3-201ENST00000308127 FAM181BA6NEQ2 426 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 C22orf46C9J442 243 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 FAM87AP0C7U9 286 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms