RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 IGHV3OR16-8A0A075B7F1 116 aa17.03■□□□□ 0.32
HOXD4-201ENST00000306324 PMS2P5A8MQ11 134 aa17.03■□□□□ 0.32
HOXD4-201ENST00000306324 TIGITQ495A1 244 aa17.03■□□□□ 0.32
HOXD4-201ENST00000306324 LYRM2Q9NU23 88 aaPredicted RBP17.03■□□□□ 0.32
HOXD4-201ENST00000306324 OR5AC2Q9NZP5 309 aa17.03■□□□□ 0.32
HOXD4-201ENST00000306324 MPC2O95563 127 aa17.02■□□□□ 0.32
HOXD4-201ENST00000306324 IGLC1P0CG04 106 aa17.02■□□□□ 0.32
HOXD4-201ENST00000306324 OR1S2Q8NGQ3 325 aa17.02■□□□□ 0.32
HOXD4-201ENST00000306324 TMEM190Q8WZ59 177 aa17.02■□□□□ 0.32
HOXD4-201ENST00000306324 SMCO3A2RU48 225 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 E5RGE8 158 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 H0YIZ8 118 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 CST7O76096 145 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 IGKV1-17P01599 117 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 PET100P0DJ07 73 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 TM4SF20Q53R12 229 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 IL34Q6ZMJ4 242 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 ZNF600Q6ZNG1 722 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 UFC1Q9Y3C8 167 aa17.01■□□□□ 0.31
HOXD4-201ENST00000306324 ZFP92A6NM28 416 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 A8MWP6 167 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 CSN3P07498 182 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 EDN2P20800 178 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 INSL3P51460 131 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 AKR1C1Q04828 323 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 ZNF414Q96IQ9 312 aa17■□□□□ 0.31
HOXD4-201ENST00000306324 PUS1Q9Y606 427 aaKnown RBP eCLIP17■□□□□ 0.31
HOXD4-201ENST00000306324 IGSF23A1L1A6 192 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 C2orf70A6NJV1 201 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 ZNF207O43670 478 aaKnown RBP16.99■□□□□ 0.31
HOXD4-201ENST00000306324 ARL16Q0P5N6 197 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 HAPLN4Q86UW8 402 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 STX12Q86Y82 276 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 TMEM252Q8N6L7 170 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 TMEM217Q8N7C4 229 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 SORL1Q92673 2214 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 TMEM213A2RRL7 107 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 DLK1P80370 383 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 TOMM20LQ6UXN7 152 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 RNF126Q9BV68 326 aa16.99■□□□□ 0.31
HOXD4-201ENST00000306324 DAZ1Q9NQZ3 744 aaKnown RBP16.99■□□□□ 0.31
HOXD4-201ENST00000306324 FOLR2P14207 255 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 CBLN1P23435 193 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 P2RY1P47900 373 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 SULT1A1P50225 295 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 ELLP55199 621 aaPredicted RBP16.98■□□□□ 0.31
HOXD4-201ENST00000306324 YPEL3P61236 119 aaPredicted RBP16.98■□□□□ 0.31
HOXD4-201ENST00000306324 SLC38A11Q08AI6 406 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 MBD2Q9UBB5 411 aa16.98■□□□□ 0.31
HOXD4-201ENST00000306324 IGKV1OR2-108A0A075B7D4 117 aa16.97■□□□□ 0.31
HOXD4-201ENST00000306324 GIPP09681 153 aaPredicted RBP16.97■□□□□ 0.31
HOXD4-201ENST00000306324 Q8WTZ3 238 aa16.97■□□□□ 0.31
HOXD4-201ENST00000306324 SIGLEC8Q9NYZ4 499 aa16.97■□□□□ 0.31
HOXD4-201ENST00000306324 IGKV1D-37A0A075B6S9 117 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 WIPF1O43516 503 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 SCAF4O95104 1147 aaKnown RBP16.96■□□□□ 0.31
HOXD4-201ENST00000306324 RD3LP0DJH9 198 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 ZNF90Q03938 601 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 BEAN1Q3B7T3 259 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 ADAMTSL5Q6ZMM2 481 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 LILRB2Q8N423 598 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 THAP8Q8NA92 274 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 THAP6Q8TBB0 222 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 DYNLRB2Q8TF09 96 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 ASB13Q8WXK3 278 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 GINS3Q9BRX5 216 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 SLC25A31Q9H0C2 315 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 ZFAND3Q9H8U3 227 aa16.96■□□□□ 0.31
HOXD4-201ENST00000306324 HBG1P69891 147 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 HBG2P69892 147 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 TMEM144Q7Z5S9 345 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 GGACTQ9BVM4 153 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 NPVFQ9HCQ7 196 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 MRPL27Q9P0M9 148 aaKnown RBP16.95■□□□□ 0.3
HOXD4-201ENST00000306324 SELENOKQ9Y6D0 94 aa16.95■□□□□ 0.3
HOXD4-201ENST00000306324 K7EMT4 169 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 TOMM40O96008 361 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 IGLV1-51P01701 117 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 PSG1P11464 419 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 RAP2BP61225 183 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 EWSR1Q01844 656 aaKnown RBP eCLIP16.94■□□□□ 0.3
HOXD4-201ENST00000306324 MARC2Q969Z3 335 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 TRGV9Q99603 122 aa16.94■□□□□ 0.3
HOXD4-201ENST00000306324 TRAV14DV4A0A0A6YYC5 116 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 FNDC10F2Z333 226 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 IL4P05112 153 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 FABP1P07148 127 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 S100A11P31949 105 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 NHLH2Q02577 135 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 FGL1Q08830 312 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 OR2F1Q13607 317 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 IGHV3-49A0A0A0MS15 119 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 EGFEM1PQ0D2K5 195 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 KPRPQ5T749 579 aaPredicted RBP16.93■□□□□ 0.3
HOXD4-201ENST00000306324 Q6ZNX1 250 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 CHAC2Q8WUX2 184 aa16.93■□□□□ 0.3
HOXD4-201ENST00000306324 DNAH3Q8TD57 4116 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 C8orf88P0DMB2 117 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 KRTAP10-11P60412 298 aa16.92■□□□□ 0.3
HOXD4-201ENST00000306324 BAXQ07812 192 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms